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PLM3_127_b2_sep16_scaffold_1166

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1166_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..170)
DNA (168bp) protein (56aa)
OAH/OAS sulfhydrylase Tax=Thauera sp. 28 RepID=N6ZFM4_9RHOO
OAH/OAS sulfhydrylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_1166_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(448..927)
DNA (480bp) protein (160aa)
putative CoA-binding protein; K06929 bin=bin1_lowGC species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
putative CoA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1166_3
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1138..1644)
DNA (507bp) protein (169aa)
Alkyl hydroperoxide reductase Tax=Sulfuricella denitrificans skB26 RepID=S6AE03_9PROT
alkyl hydroperoxide reductase
Tax=CG_Rhodocyc_01
PLM3_127_b2_sep16_scaffold_1166_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1707..2762)
DNA (1056bp) protein (352aa)
aminopeptidase Tax=Cupriavidus sp. BIS7 RepID=UPI0002E071D5
macromolecule metabolism
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_1166_5
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2755..3393)
DNA (639bp) protein (213aa)
Probableacetyltransferase/hydrolase Tax=Nitrosospira sp. APG3 RepID=M5DHN9_9PROT
acetyltransferase/hydrolase
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM3_127_b2_sep16_scaffold_1166_6
unknown

Not on your lists

comp(3395..3538)
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1166_7
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3687..4925)
DNA (1239bp) protein (413aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS31451.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp. BRH_c12.;"
ABC transporter, periplasmic branched chain amino acid binding protein bin=GWF2_Methylomirabilis_70_14 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched chain amino acid ABC transporter substrate-binding protein
PLM3_127_b2_sep16_scaffold_1166_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4975..6360)
DNA (1386bp) protein (462aa)
Enoyl-CoA hydratase Tax=Oceanibaculum indicum P24 RepID=K2JBU4_9PROT
enoyl-CoA hydratase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_1166_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6371..6934)
DNA (564bp) protein (188aa)
TRAP-type mannitol/chloroaromatic compound transporter small permease Tax=Oceanibaculum indicum P24 RepID=K2JAX0_9PROT
TRAP-type mannitol/chloroaromatic compound transporter small permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_1166_10
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7001..8062)
DNA (1062bp) protein (354aa)
TRAP dicarboxylate transporter subunit DctP Tax=Thalassospira profundimaris WP0211 RepID=K2LX17_9PROT
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:EKF09562.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
extracellular solute-binding protein, family 7
PLM3_127_b2_sep16_scaffold_1166_11
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8443..8667
DNA (225bp) protein (75aa)
hypothetical protein bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
PLM3_127_b2_sep16_scaffold_1166_12
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8664..9047
DNA (384bp) protein (128aa)
Death-on-curing family protein Tax=Acidovorax sp. NO-1 RepID=H0BXF1_9BURK
Death-on-curing family protein {ECO:0000313|EMBL:EHL22761.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
death-on-curing family protein
PLM3_127_b2_sep16_scaffold_1166_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9100..10254)
DNA (1155bp) protein (385aa)
hypothetical protein OPAG_01638 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Putative epoxide hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1166_14
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10508..11125)
DNA (618bp) protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM31742.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
PLM3_127_b2_sep16_scaffold_1166_15
Kingella denitrificans, Kingella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11360..12226)
DNA (867bp) protein (289aa)
Sel1 repeat protein Tax=Kingella denitrificans ATCC 33394 RepID=F0F1U1_9NEIS
Sel1 repeat protein {ECO:0000313|EMBL:EGC16482.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella.;" source="Kingella denitrificans ATCC 33394.;"
msfA; vHiSLR1, Sel1-like repeat protein
PLM3_127_b2_sep16_scaffold_1166_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12299..13168)
DNA (870bp) protein (290aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily Tax=Pleurocapsa sp. PCC 7327 RepID=K9SY48_9CYAN
alpha/beta hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1166_17
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13409..14602)
DNA (1194bp) protein (398aa)
aminotransferase Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037C4ADA
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_1166_18
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14777..15712
DNA (936bp) protein (312aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW59_PSEUX
PLM3_127_b2_sep16_scaffold_1166_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15903..17000
DNA (1098bp) protein (366aa)
mandelate racemase (EC:5.1.2.2)
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase Tax=Bradyrhizobium sp. WSM471 RepID=H5YKP7_9BRAD
Mandelate racemase {ECO:0000313|EMBL:ETX00107.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_1166_20
unknown

Not on your lists

17527..17793
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1166_21
unknown

Not on your lists

17859..18116
DNA (258bp) protein (86aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1166_22
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18227..19780
DNA (1554bp) protein (518aa)
Amidohydrolase 2 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS74_PARL1
Uncharacterized protein {ECO:0000313|EMBL:ETX06850.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
amidohydrolase 2
PLM3_127_b2_sep16_scaffold_1166_23
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19797..20357)
DNA (561bp) protein (187aa)
Adenylate cyclase Tax=Pseudomonas stutzeri RCH2 RepID=L0GMF6_PSEST
Cytochrome C {ECO:0000313|EMBL:KIL06113.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
adenylate cyclase
PLM3_127_b2_sep16_scaffold_1166_24
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20505..21710)
DNA (1206bp) protein (402aa)
Thiol oxidoreductase Tax=Azotobacter vinelandii RepID=C1DND1_AZOVD
thiol oxidoreductase
Thiol oxidoreductase {ECO:0000313|EMBL:ACO81289.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii (strain DJ / ATCC BAA-1303).;"
PLM3_127_b2_sep16_scaffold_1166_25
unknown

Not on your lists

21839..22036
DNA (198bp) protein (66aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1166_26
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(22277..24382)
DNA (2106bp) protein (702aa)
Uncharacterized protein bin=GWC2_Nitrospirae_57_13 species=Rhodanobacter spathiphylli genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=GWC2_Nitrospirae_57_13_curated
PLM3_127_b2_sep16_scaffold_1166_27
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24702..26087
DNA (1386bp) protein (462aa)
Putative D-lactate dehydrogenase Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9I6_AZOL4
Lactate dehydrogenase {ECO:0000313|EMBL:KJR66699.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
putative D-lactate dehydrogenase
PLM3_127_b2_sep16_scaffold_1166_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26269..26622
DNA (354bp) protein (118aa)
Putative uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q138C9_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE39560.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
PLM3_127_b2_sep16_scaffold_1166_29
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26699..27757
DNA (1059bp) protein (353aa)
beta-lactamase Tax=Burkholderia sp. WSM4176 RepID=UPI00037BB1A4
Beta-lactamase {ECO:0000313|EMBL:KDR41909.1}; Beta-lactamase class C and other penicillin binding proteins {ECO:0000313|EMBL:CDY77094.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1166_30
unknown

Not on your lists

28049..28372
DNA (324bp) protein (108aa)

This feature has no annotations

Displaying 30 items

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