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PLM3_127_b2_sep16_scaffold_9271

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_9271_1
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

comp(3..524)
DNA (522bp) protein (174aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANS2_IGNAJ
gpm; phosphoglycerate mutase 1
Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
PLM3_127_b2_sep16_scaffold_9271_2
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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700..1203
DNA (504bp) protein (168aa)
O-antigen polymerase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNE3_SIDLE
O-antigen polymerase
Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
PLM3_127_b2_sep16_scaffold_9271_3
unknown

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1193..1378
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_9271_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1470..1880
DNA (411bp) protein (137aa)
Rhodanese domain protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNE2_SIDLE
Rhodanese domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_9271_5
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1881..2168
DNA (288bp) protein (96aa)
Glutaredoxin 3 protein Tax=Herbaspirillum sp. GW103 RepID=I3CMQ8_9BURK
grxC; glutaredoxin
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM3_127_b2_sep16_scaffold_9271_6
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2194..2652
DNA (459bp) protein (153aa)
preprotein translocase subunit SecB Tax=Rhodocyclaceae RepID=UPI000361F016
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
preprotein translocase subunit SecB
PLM3_127_b2_sep16_scaffold_9271_7
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2877..3320
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Nitrosospira sp. APG3 RepID=M5DK22_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_9271_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3317..4309
DNA (993bp) protein (331aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=GPDA_NITMU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_9271_9
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4306..4773)
DNA (468bp) protein (156aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000255|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000255|HAMAP-Rule:MF_01885}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
tRNA (cytidine(34)-2'-O)-methyltransferase Tax=Methylovorus sp. (strain SIP3-4) RepID=TRML_METSD
TrmH family RNA methyltransferase
PLM3_127_b2_sep16_scaffold_9271_10
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5036..5623)
DNA (588bp) protein (196aa)
Phosphoribosyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6ADH3_9PROT
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:BAN36468.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM3_127_b2_sep16_scaffold_9271_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5795..6820
DNA (1026bp) protein (342aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
biotin synthase (EC:2.8.1.6)
Biotin synthase Tax=Nitrosospira sp. APG3 RepID=M5DIG2_9PROT
PLM3_127_b2_sep16_scaffold_9271_12
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6889..8046
DNA (1158bp) protein (386aa)
8-amino-7-oxononanoate synthase {ECO:0000256|HAMAP-Rule:MF_01693, ECO:0000256|SAAS:SAAS00016806}; Short=AONS {ECO:0000256|HAMAP-Rule:MF_01693};; EC=2.3.1.47 {ECO:0000256|HAMAP-Rule:MF_01693, ECO:0000256|SAAS:SAAS00016806};; 7-keto-8-amino-pelargonic acid synthase {ECO:0000256|HAMAP-Rule:MF_01693}; 8-amino-7-ketopelargonate synthase {ECO:0000256|HAMAP-Rule:MF_01693}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
8-amino-7-oxononanoate synthase (EC:2.3.1.47)
8-amino-7-oxononanoate synthase Tax=Sulfuricella denitrificans skB26 RepID=S6AB18_9PROT
PLM3_127_b2_sep16_scaffold_9271_13
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8043..8912
DNA (870bp) protein (290aa)
Malonyl-[acyl-carrier protein] O-methyltransferase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNB4_SIDLE
biotin biosynthesis protein BioC
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_9271_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8923..9585
DNA (663bp) protein (221aa)
dethiobiotin synthase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GZB0_METFK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_9271_15
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9671..10015)
DNA (345bp) protein (115aa)
Putative small integral membrane protein Tax=Pseudomonas sp. GM55 RepID=J3GV17_9PSED
small integral membrane protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_9271_16
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10024..10749)
DNA (726bp) protein (242aa)
Cytochrome c oxidase subunit 3 Tax=Betaproteobacteria bacterium MOLA814 RepID=V5AFM4_9PROT
cytochrome C oxidase subunit III
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_9271_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10765..11466)
DNA (702bp) protein (234aa)
Cytochrome c oxidase subunit 3 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4Y192_9PROT
cytochrome C oxidase
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
PLM3_127_b2_sep16_scaffold_9271_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11484..13262)
DNA (1779bp) protein (593aa)
Alternative cytochrome c oxidase subunit 1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4YHT0_9PROT
coxN; cytochrome C oxidase
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_9271_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13342..14694)
DNA (1353bp) protein (451aa)
Alternative cytochrome c oxidase subunit 2 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4YS04_9PROT
cytochrome c oxidase subunit II
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_9271_20
unknown

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comp(14828..14935)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 20 items

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