name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM3_127_b2_sep16_scaffold_188_1
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..247)
|
Iron-sulfur cluster assembly protein SufD Tax=Nitrosospira sp. APG3 RepID=M5DFJ5_9PROT
FeS assembly protein SufD
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
|
|
PLM3_127_b2_sep16_scaffold_188_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(372..1145)
|
FeS assembly ATPase SufC Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XB6_RHOFD
FeS assembly ATPase SufC
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
|
|
PLM3_127_b2_sep16_scaffold_188_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1142..2575)
|
Iron-sulfur cluster assembly protein SufB Tax=Nitrosospira sp. APG3 RepID=M5DFE2_9PROT
cysteine desulfurase activator complex subunit SufB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
|
|
PLM3_127_b2_sep16_scaffold_188_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2605..2928)
|
HesB/YadR/YfhF Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB69_NITMU
Uncharacterized protein {ECO:0000313|EMBL:KIO50202.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
HesB/YadR/YfhF
|
|
PLM3_127_b2_sep16_scaffold_188_5
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2958..4100)
|
Cysteine desulfurase Tax=Nitrosospira sp. APG3 RepID=M5DEX5_9PROT
cysteine desulfurase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
|
|
PLM3_127_b2_sep16_scaffold_188_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4111..4596)
|
Transcriptional regulator, BadM/Rrf2 family Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMU8_ACCPU
BadM/Rrf2 family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
PLM3_127_b2_sep16_scaffold_188_7
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4679..5431)
|
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6AGE2_9PROT
Tax=CG_Beta_01
|
|
PLM3_127_b2_sep16_scaffold_188_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5485..6225)
|
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
RNA methyltransferase TrmH, group 1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB91_NITMU
RNA methyltransferase TrmH
|
|
PLM3_127_b2_sep16_scaffold_188_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6270..7067
|
inositol-1(or 4)-monophosphatase (EC:3.1.3.25)
Inositol-1-monophosphatase Tax=Nitrosospira sp. APG3 RepID=M5DNL2_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
PLM3_127_b2_sep16_scaffold_188_10
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7302..7775
|
uncharacterized protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
|
|
PLM3_127_b2_sep16_scaffold_188_11
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7756..8298
|
Uncharacterized protein Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8L5_ALIDK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
|
|
PLM3_127_b2_sep16_scaffold_188_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8364..10901
|
DNA mismatch repair protein MutS Tax=Nitrosospira sp. APG3 RepID=M5DFU5_9PROT
DNA mismatch repair protein MutS
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
|
|
PLM3_127_b2_sep16_scaffold_188_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria
|
Not on your lists |
comp(10973..11368)
|
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Cylindrospermum stagnale genus=Cylindrospermum taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
|
|
PLM3_127_b2_sep16_scaffold_188_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(11365..11613)
|
hypothetical protein Tax=Synechococcus sp. PCC 7336 RepID=UPI00034BC4AD
AbrB family transcriptional regulator
Tax=GWA2_Rokubacteria_70_23_curated
|
|
PLM3_127_b2_sep16_scaffold_188_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11962..13083)
|
Adenylate/guanylate cyclase bin=GWC2_Methylomirabilis_70_16 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
adenylate/guanylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
|
|
PLM3_127_b2_sep16_scaffold_188_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(13080..13475)
|
Response regulator receiver protein bin=GWF2_Methylomirabilis_70_14 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
response regulator receiver protein
Tax=GWA2_Rokubacteria_70_23_curated
|
|
PLM3_127_b2_sep16_scaffold_188_17
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13460..15010)
|
histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Histidine kinase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y592_LEPCP
|
|
PLM3_127_b2_sep16_scaffold_188_18
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15007..15627)
|
UPI0003CFFFEE related cluster Tax=unknown RepID=UPI0003CFFFEE
Uncharacterized protein {ECO:0000313|EMBL:ESZ43578.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
electron transport protein SCO1/SenC
|
|
PLM3_127_b2_sep16_scaffold_188_19
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15624..16691)
|
Putative ABC transporter substrate-binding protein Tax=Rhizobium sp. (strain NGR234) RepID=C3KNN6_RHISN
ABC transporter substrate-binding protein
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:ACP21694.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
|
|
PLM3_127_b2_sep16_scaffold_188_20
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16701..17717)
|
Putative ABC transporter substrate-binding protein Tax=Rhizobium sp. (strain NGR234) RepID=C3KNN6_RHISN
ABC transporter substrate-binding protein
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:ACP21694.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
|
|
PLM3_127_b2_sep16_scaffold_188_21
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17843..18901)
|
Putative ABC transporter substrate-binding protein Tax=Rhizobium sp. (strain NGR234) RepID=C3KNN6_RHISN
ABC transporter substrate-binding protein
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:ACP21694.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
|
|
PLM3_127_b2_sep16_scaffold_188_22
unknown
|
Not on your lists |
comp(18915..19121)
|
This feature has no annotations |
|
PLM3_127_b2_sep16_scaffold_188_23
unknown
|
Not on your lists |
comp(19189..19368)
|
This feature has no annotations |
|
PLM3_127_b2_sep16_scaffold_188_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19384..19677
|
Putative uncharacterized protein Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SHT7_GALCS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
PLM3_127_b2_sep16_scaffold_188_25
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19688..20062
|
Putative transcription regulator with HTH domain Tax=Thauera sp. (strain MZ1T) RepID=C4KD79_THASP
putative transcription regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
|
|
PLM3_127_b2_sep16_scaffold_188_26
unknown
|
Not on your lists |
comp(20302..20412)
|
This feature has no annotations |
|
PLM3_127_b2_sep16_scaffold_188_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20501..21529)
|
Membrane-bound lytic murein transglycosylase B Tax=Nitrosospira sp. APG3 RepID=M5DUK5_9PROT
lytic murein transglycosylase B
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
PLM3_127_b2_sep16_scaffold_188_28
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21534..22742)
|
Uncharacterized protein Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9R2_NITMU
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
|
|
PLM3_127_b2_sep16_scaffold_188_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22739..23200)
|
Cytochrome c heme lyase subunit CcmL Tax=Nitrosospira sp. APG3 RepID=M5DI83_9PROT
cytochrome C biogenesis protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
PLM3_127_b2_sep16_scaffold_188_30
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23206..23730)
|
Periplasmic protein thiol Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9R0_NITMU
periplasmic protein thiol
Tax=GWA2_Gallionellales_60_18_curated
|