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PLM3_127_b2_sep16_scaffold_396

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_396_1
unknown

Not on your lists

comp(39..719)
DNA (681bp) protein (227aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_396_2
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(878..1183)
DNA (306bp) protein (102aa)
Uncharacterized protein Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LNN1_DINSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV95125.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12).;"
PLM3_127_b2_sep16_scaffold_396_3
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1312..2178
DNA (867bp) protein (289aa)
UPI0003CF8430 related cluster Tax=unknown RepID=UPI0003CF8430
Uncharacterized protein {ECO:0000313|EMBL:ESY64057.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_396_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2346..2957)
DNA (612bp) protein (204aa)
Uncharacterized protein Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A115_PELCD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_396_5
unknown

Not on your lists

comp(3023..3226)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_396_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3223..4350)
DNA (1128bp) protein (376aa)
Selenide water dikinase Tax=Marinobacter santoriniensis NKSG1 RepID=M7CP30_9ALTE
segregation protein B
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_396_7
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4590..5087)
DNA (498bp) protein (166aa)
Putative uncharacterized protein Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VUH5_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM3_127_b2_sep16_scaffold_396_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5312..5962)
DNA (651bp) protein (217aa)
Putative uncharacterized protein Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W2U1_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_396_9
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5946..6701)
DNA (756bp) protein (252aa)
Glycosyl transferase, family 2 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W2U2_9BURK
Glycosyltransferase involved in cell wall biogenesis {ECO:0000313|EMBL:CDI04032.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
family 2 glycosyl transferase
PLM3_127_b2_sep16_scaffold_396_10
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6778..7602)
DNA (825bp) protein (275aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTH4_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:CDI01083.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_396_11
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7744..9879)
DNA (2136bp) protein (712aa)
pyridine nucleotide-disulfide oxidoreductase Tax=Methylohalobius crimeensis RepID=UPI0003B595B7
hypothetical protein
Tax=GWA2_Rhodocyclales_65_20_curated
PLM3_127_b2_sep16_scaffold_396_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10151..11617
DNA (1467bp) protein (489aa)
hypothetical protein bin=GWF1_Burkholderiales_GWF1_66_17 species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_396_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11739..12242
DNA (504bp) protein (168aa)
Putative transcription elongation factor Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60BR4_METCA
transcription elongation factor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_396_14
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12423..13742
DNA (1320bp) protein (440aa)
ABC transporter substrate-binding protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002FEC31B
Extracellular solute-binding protein {ECO:0000313|EMBL:EKE71595.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ABC transporter substrate-binding protein
PLM3_127_b2_sep16_scaffold_396_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14049..15725
DNA (1677bp) protein (559aa)
N-acyl-D-aspartate/D-glutamate deacylase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WPJ7_9BURK
N-acyl-D-aspartate/D-glutamate deacylase {ECO:0000313|EMBL:EHR71596.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
D-aminoacylase domain-containing protein
PLM3_127_b2_sep16_scaffold_396_16
Chlorobaculum parvum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

16066..16365
DNA (300bp) protein (100aa)
Putative uncharacterized protein Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QM00_CHLP8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF10953.1}; Flags: Precursor;; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobaculum parvum (strain NCIB 8327) (Chlorobium vibrioforme subsp.; thiosulfatophilum (strain DSM 263 / NCIB 8327)).;"
PLM3_127_b2_sep16_scaffold_396_17
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16434..17309)
DNA (876bp) protein (292aa)
Transposase Tax=Acidovorax sp. CF316 RepID=J1EG78_9BURK
Transposase {ECO:0000313|EMBL:KFB73426.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
toxin RelE
PLM3_127_b2_sep16_scaffold_396_18
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17433..18800
DNA (1368bp) protein (456aa)
hypothetical protein Tax=Thiobacillus denitrificans RepID=UPI0003739A91
Patatin {ECO:0000313|EMBL:EXI69273.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
patatin
PLM3_127_b2_sep16_scaffold_396_19
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

19028..19312
DNA (285bp) protein (95aa)
hypothetical protein Tax=Methylotenera sp. 1P/1 RepID=UPI00037C2A75
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM3_127_b2_sep16_scaffold_396_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19399..19797
DNA (399bp) protein (133aa)
Glyoxalase/bleomycin resistance protein/dioxygenase bin=GWE1_T_denit_62_9 species=Halomonas sp. KM-1 genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=GWE1_Thiobacillus_62_9_curated
PLM3_127_b2_sep16_scaffold_396_21
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20065..20703)
DNA (639bp) protein (213aa)
Glutathione peroxidase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMC9_ACCPU
glutathione peroxidase
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
PLM3_127_b2_sep16_scaffold_396_22
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20753..21940
DNA (1188bp) protein (396aa)
L-carnitine dehydratase/bile acid-inducible protein F Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BD8_DECAR
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_396_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22123..23436
DNA (1314bp) protein (438aa)
Permease of the major facilitator superfamily Tax=Nitrosospira sp. APG3 RepID=M5DHG1_9PROT
major facilitator transporter
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_396_24
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23533..25071
DNA (1539bp) protein (513aa)
Uncharacterized protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLP7_AZOSU
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_396_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25311..25976)
DNA (666bp) protein (222aa)
carboxylesterase Tax=Herbaspirillum sp. JC206 RepID=UPI00031DB01A
carboxylesterase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_396_26
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26174..26767)
DNA (594bp) protein (198aa)
molybdenum cofactor biosynthesis protein MogA Tax=Methyloversatilis sp. NVD RepID=UPI00037F6A1D
mogA; molybdenum cofactor biosynthesis protein MogA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_396_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26977..27471)
DNA (495bp) protein (165aa)
hypothetical protein Tax=Pandoraea sp. B-6 RepID=UPI0003632EE6
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_396_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27591..28931
DNA (1341bp) protein (447aa)
Peptidase U62, modulator of DNA gyrase Tax=Sulfuricella denitrificans skB26 RepID=S6B1Y6_9PROT
peptidase U62, modulator of DNA gyrase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_396_29
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29196..29822
DNA (627bp) protein (209aa)
hypothetical protein Tax=Thiobacillus denitrificans RepID=UPI00037CD809
G-D-S-L family lipolytic protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_396_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29852..30655
DNA (804bp) protein (268aa)
Sulfonate/nitrate/taurine transport system ATP-binding protein Tax=Burkholderia phenoliruptrix BR3459a RepID=K0DM93_9BURK
sulfonate/nitrate/taurine transport system ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying items 1-30 of 64 in total

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