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PLM3_127_b2_sep16_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 177 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6_1
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..1271
DNA (1269bp) protein (423aa)
Uncharacterized protein Tax=Actinomyces viscosus C505 RepID=T5LX01_ACTVI
recombinase
Tax=CG_Solirubrobact_01
PLM3_127_b2_sep16_scaffold_6_trna_3
unknown

Not on your lists

comp(1234..1306)
DNA (73bp)
transferRNA Glu
PLM3_127_b2_sep16_scaffold_6_trna_2
unknown

Not on your lists

comp(1320..1391)
DNA (72bp)
transferRNA Gln
PLM3_127_b2_sep16_scaffold_6_2
actinobacterium SCGC AAA027-L06, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1454..2914)
DNA (1461bp) protein (487aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; species="Bacteria; Actinobacteria.;" source="actinobacterium SCGC AAA027-L06.;"
Glutamate--tRNA ligase Tax=actinobacterium SCGC AAA027-L06 RepID=J9H5A4_9ACTN
glutamyl-tRNA synthetase
PLM3_127_b2_sep16_scaffold_6_3
Streptomyces leeuwenhoekii, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3004..4098
DNA (1095bp) protein (365aa)
glycosyltransferase Tax=Curtobacterium ginsengisoli RepID=UPI0003B32C07
Uncharacterized glycosyltransferase MJ1607 {ECO:0000313|EMBL:CQR60996.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces leeuwenhoekii.;"
glycosyltransferase
PLM3_127_b2_sep16_scaffold_6_4
Streptomyces leeuwenhoekii, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4312..5376
DNA (1065bp) protein (355aa)
glycosyltransferase Tax=Curtobacterium ginsengisoli RepID=UPI0003B32C07
Uncharacterized glycosyltransferase MJ1607 {ECO:0000313|EMBL:CQR60996.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces leeuwenhoekii.;"
glycosyltransferase
PLM3_127_b2_sep16_scaffold_6_5
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5415..6200)
DNA (786bp) protein (262aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconate delta-isomerase {ECO:0000313|EMBL:ABD12978.1}; EC=5.3.3.10 {ECO:0000313|EMBL:ABD12978.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
5-carboxymethyl-2-hydroxymuconate delta-isomerase Tax=Frankia sp. (strain CcI3) RepID=Q2J6W4_FRASC
PLM3_127_b2_sep16_scaffold_6_6
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6255..7298)
DNA (1044bp) protein (348aa)
Putative naringenin-chalcone synthase Tax=Saccharomonospora glauca K62 RepID=I1D1S7_9PSEU
Chalcone synthase {ECO:0000313|EMBL:KJK46841.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
chalcone and stilbene synthase domain-containing protein
PLM3_127_b2_sep16_scaffold_6_7
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7295..8212)
DNA (918bp) protein (306aa)
Uncharacterized protein Tax=Spiribacter sp. UAH-SP71 RepID=U5T357_9GAMM
Methyltransferase {ECO:0000313|EMBL:EWC64606.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_6_8
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8209..9369)
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase, short-chain specific {ECO:0000313|EMBL:EWC64604.1}; EC=1.3.8.1 {ECO:0000313|EMBL:EWC64604.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Acyl-CoA dehydrogenase domain protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLN7_9CHLR
acyl-CoA dehydrogenase
PLM3_127_b2_sep16_scaffold_6_9
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

10002..10145
DNA (144bp) protein (48aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W2M1_9ACTO
hypothetical protein
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_127_b2_sep16_scaffold_6_10
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10162..10509
DNA (348bp) protein (116aa)
hypothetical protein Tax=Longispora albida RepID=UPI000371B89B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ88928.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_127_b2_sep16_scaffold_6_11
unknown

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comp(11066..11509)
DNA (444bp) protein (148aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6_12
unknown

Not on your lists

comp(11676..12068)
DNA (393bp) protein (131aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6_13
Actinospica robiniae, Actinospica, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12219..12890
DNA (672bp) protein (224aa)
haloacid dehalogenase Tax=Patulibacter americanus RepID=UPI0003B67F34
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:ETA70994.1}; species="Bacteria; Actinobacteria; Catenulisporales; Actinospicaceae; Actinospica.;" source="Actinospica robiniae DSM 44927.;"
HAD-superfamily hydrolase
PLM3_127_b2_sep16_scaffold_6_14
Streptomyces lividans, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12887..13720
DNA (834bp) protein (278aa)
hypothetical protein Tax=Streptomyces sp. AA1529 RepID=UPI0002D8241E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ13233.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lividans TK24.;"
PLM3_127_b2_sep16_scaffold_6_15
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13762..14499
DNA (738bp) protein (246aa)
Methyltransferase type 11 {ECO:0000313|EMBL:AKG46607.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
Methyltransferase family protein bin=GWB2_Chloroflexi_54_36 species=Frankia sp. QA3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Methyltransferase type 11
PLM3_127_b2_sep16_scaffold_6_16
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14722..15966)
DNA (1245bp) protein (415aa)
L-threonine ammonia-lyase (EC:4.3.1.19)
Threonine dehydratase, medium form Tax=Saccharomonospora azurea NA-128 RepID=H8GDR0_9PSEU
Threonine dehydratase, medium form {ECO:0000313|EMBL:EHY88854.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
PLM3_127_b2_sep16_scaffold_6_17
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(16031..16684)
DNA (654bp) protein (218aa)
Glr1828 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NJK4_GLOVI
hypothetical protein
Glr1828 protein {ECO:0000313|EMBL:BAC89769.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM3_127_b2_sep16_scaffold_6_18
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(16681..17238)
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U0P3_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY88011.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
PLM3_127_b2_sep16_scaffold_6_19
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17315..19084)
DNA (1770bp) protein (590aa)
Putative enzyme {ECO:0000313|EMBL:CCB77057.1}; EC=2.3.3.- {ECO:0000313|EMBL:CCB77057.1};; Uncharacterized protein {ECO:0000313|EMBL:AEW96720.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
transferase Tax=Nocardiopsis baichengensis RepID=UPI0003469304
alpha-isopropylmalate/homocitrate synthase family transferase
PLM3_127_b2_sep16_scaffold_6_20
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19194..20114)
DNA (921bp) protein (307aa)
Branched-chain amino acid aminotransferase Tax=Frankia sp. CN3 RepID=G6HIP4_9ACTO
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EFC83713.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
branched-chain amino acid aminotransferase
PLM3_127_b2_sep16_scaffold_6_21
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20159..21409)
DNA (1251bp) protein (417aa)
3-isopropylmalate dehydrogenase Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FAD6_VERMA
3-isopropylmalate dehydrogenase
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:AEB43363.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM3_127_b2_sep16_scaffold_6_22
unknown

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comp(21409..21597)
DNA (189bp) protein (63aa)
PLM3_127_b2_sep16_scaffold_6_23
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(21594..23144)
DNA (1551bp) protein (517aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
2-isopropylmalate synthase Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=LEU1_ACIFD
2-isopropylmalate synthase
PLM3_127_b2_sep16_scaffold_6_24
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23278..24903)
DNA (1626bp) protein (542aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ACY99081.1}; EC=1.1.1.95 {ECO:0000313|EMBL:ACY99081.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
D-3-phosphoglycerate dehydrogenase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ABQ8_THECD
PLM3_127_b2_sep16_scaffold_6_25
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24913..25974)
DNA (1062bp) protein (354aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase Tax=Cystobacter fuscus DSM 2262 RepID=S9R6E9_9DELT
PLM3_127_b2_sep16_scaffold_6_26
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26069..26590)
DNA (522bp) protein (174aa)
acetolactate synthase small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:AEH11038.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AEH11038.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Acetolactate synthase, small subunit Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B516_FRADG
PLM3_127_b2_sep16_scaffold_6_27
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26649..28403)
DNA (1755bp) protein (585aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
acetolactate synthase Tax=Sporichthya polymorpha RepID=UPI0003774E9E
acetolactate synthase large subunit, biosynthetic type
PLM3_127_b2_sep16_scaffold_6_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

28714..29643
DNA (930bp) protein (310aa)
Alcohol dehydrogenase zinc-binding domain protein Tax=Calothrix sp. PCC 7507 RepID=K9PD15_9CYAN
alcohol dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying items 1-30 of 177 in total

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