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PLM3_127_b2_sep16_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_15_1
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31..1188)
DNA (1158bp) protein (386aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI000373E5E3
Transposase {ECO:0000313|EMBL:KHD75694.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
transposase tn3 family protein
PLM3_127_b2_sep16_scaffold_15_2
Pseudomonas cichorii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2866..3411)
DNA (546bp) protein (182aa)
HrpW Tax=Pseudomonas cichorii RepID=Q20IN6_PSECI
HrpW {ECO:0000313|EMBL:ABA47299.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas cichorii.;"
Fe-S oxidoreductase
PLM3_127_b2_sep16_scaffold_15_3
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

3602..5050
DNA (1449bp) protein (483aa)
isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] bin=bin8_Chloro species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
isopropylmalate isomerase large subunit (EC:4.2.1.33)
Tax=CSP1_4_Chloroflexi
PLM3_127_b2_sep16_scaffold_15_4
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

5047..5673
DNA (627bp) protein (209aa)
3-isopropylmalate dehydratase small subunit bin=GWC2_Chloroflexi_73_18 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
leuD; isopropylmalate isomerase small subunit
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_127_b2_sep16_scaffold_15_5
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5690..7042
DNA (1353bp) protein (451aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2).;"
3-phosphoshikimate 1-carboxyvinyltransferase Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z568_DESAT
PLM3_127_b2_sep16_scaffold_15_6
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7413..8033)
DNA (621bp) protein (207aa)
adenylyl cyclase Tax=Streptomyces canus RepID=UPI00037EC6D5
Putative uncharacterized protein {ECO:0000313|EMBL:EFL15145.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_15_7
Streptomyces phage mu1/6, Caudovirales, Viruses

Not on your lists

comp(8047..8436)
DNA (390bp) protein (130aa)
Transcriptional regulator Tax=Streptomyces phage mu1/6 RepID=Q1WDJ8_9CAUD
Transcriptional regulator {ECO:0000313|EMBL:ABD94167.1}; species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Streptomyces phage mu1/6.;"
helix-turn-helix domain-containing protein
PLM3_127_b2_sep16_scaffold_15_8
unknown

Not on your lists

8569..8715
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_15_9
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

8862..9179
DNA (318bp) protein (106aa)
pyridoxamine 5''''-phosphate oxidase Tax=Ruania albidiflava RepID=UPI0003B3FE48
pyridoxamine 5'-phosphate oxidase-like protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3_127_b2_sep16_scaffold_15_10
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9701..10699
DNA (999bp) protein (333aa)
Patatin Tax=Thermincola potens (strain JR) RepID=D5X9C5_THEPJ
patatin
Patatin {ECO:0000313|EMBL:ADG83029.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
PLM3_127_b2_sep16_scaffold_15_11
Paenibacillus barengoltzii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10651..11181)
DNA (531bp) protein (177aa)
PfpI family intracellular protease Tax=Paenibacillus barengoltzii G22 RepID=R9LHC6_9BACL
PfpI family intracellular protease {ECO:0000313|EMBL:EOS57968.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus barengoltzii G22.;"
glutamine amidotransferase
PLM3_127_b2_sep16_scaffold_15_12
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

11307..12386
DNA (1080bp) protein (360aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000360E76B
hypothetical protein
Tax=RBG_16_Actinobacteria_70_17_curated
PLM3_127_b2_sep16_scaffold_15_13
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12511..13674)
DNA (1164bp) protein (388aa)
levansucrase Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002885E2D
Levansucrase {ECO:0000313|EMBL:AKG41614.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
glycoside hydrolase 68 family protein
PLM3_127_b2_sep16_scaffold_15_14
unknown

Not on your lists

comp(13692..13844)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_15_15
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13862..14341)
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K7V3_SACES
Acetyltransferase {ECO:0000313|EMBL:KJY37451.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_15_16
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14507..15151)
DNA (645bp) protein (215aa)
Siroheme synthase bin=GWC2_Methylomirabilis_70_16 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
uroporphyrin-III C-methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_127_b2_sep16_scaffold_15_17
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(15167..15787)
DNA (621bp) protein (207aa)
Putative ABC transporter (Protein binding) Tax=Micromonospora lupini str. Lupac 08 RepID=I0LBI8_9ACTO
binding-protein-dependent transport systems inner membrane component
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_127_b2_sep16_scaffold_15_18
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16044..16844)
DNA (801bp) protein (267aa)
ABC transporter related protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A7N1_THECD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACY96620.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_127_b2_sep16_scaffold_15_19
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16844..17965)
DNA (1122bp) protein (374aa)
ABC transporter, substrate-binding protein, aliphatic sulphonates Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BCS4_STRRD
aliphatic sulfonates ABC transporter substrate-binding protein
ABC transporter, substrate-binding protein, aliphatic sulphonates {ECO:0000313|EMBL:ACZ91894.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_127_b2_sep16_scaffold_15_20
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(18189..18707)
DNA (519bp) protein (173aa)
Methyladenine glycosylase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C623_SPHTD
methyladenine glycosylase
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3_127_b2_sep16_scaffold_15_21
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(19273..20037)
DNA (765bp) protein (255aa)
UbiA prenyltransferase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAS6_SPHTD
UbiA prenyltransferase
UbiA prenyltransferase {ECO:0000313|EMBL:ACZ40919.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_127_b2_sep16_scaffold_15_22
unknown

Not on your lists

comp(20130..20366)
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_15_23
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20613..21389
DNA (777bp) protein (259aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
UDP pyrophosphate synthase Tax=Nonomuraea coxensis RepID=UPI000362D838
Z-farnesyl diphosphate synthase
PLM3_127_b2_sep16_scaffold_15_24
unknown

Not on your lists

21415..21900
DNA (486bp) protein (162aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_15_25
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21893..24049
DNA (2157bp) protein (719aa)
Peptidase S9 prolyl oligopeptidase active site domain protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A8L9_THECD
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ACY96714.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_127_b2_sep16_scaffold_15_26
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24236..25792
DNA (1557bp) protein (519aa)
pknB; Two component serine/threonine-protein kinase with PASTA sensors (EC:2.7.11.1)
Two component serine/threonine-protein kinase with PASTA sensors {ECO:0000313|EMBL:CCG01041.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CCG01041.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
Two component serine/threonine-protein kinase with PASTA sensors Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RJC8_BLASD
PLM3_127_b2_sep16_scaffold_15_27
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(25960..26775)
DNA (816bp) protein (272aa)
echA; enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein Tax=Sciscionella marina RepID=UPI00036E3C99
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_127_b2_sep16_scaffold_15_28
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(26967..29186)
DNA (2220bp) protein (740aa)
CoA-binding domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAS4_CONWI
CoA-binding protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_127_b2_sep16_scaffold_15_29
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(29321..30787)
DNA (1467bp) protein (489aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase Tax=Frankia sp. (strain CcI3) RepID=Q2J6G3_FRASC
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_127_b2_sep16_scaffold_15_30
actinobacterium acAMD-2, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30928..31437
DNA (510bp) protein (170aa)
Transcriptional regulator, AsnC family protein Tax=marine actinobacterium PHSC20C1 RepID=A4AH93_9ACTN
AsnC family transcriptional regulator {ECO:0000313|EMBL:KGA11489.1}; species="Bacteria; Actinobacteria.;" source="actinobacterium acAMD-2.;"
AsnC family transcriptional regulator
Displaying items 1-30 of 123 in total

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