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PLM3_127_b2_sep16_scaffold_6162

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6162_1
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..713)
DNA (711bp) protein (237aa)
branched-chain amino acid ABC transporter substrate-binding protein Tax=Curvibacter lanceolatus RepID=UPI00037D7222
twin-arginine translocation pathway signal protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_6162_2
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

983..1654
DNA (672bp) protein (224aa)
pcaI; 3-oxoadipate CoA-transferase subunit A (EC:2.8.3.6)
3-oxoadipate CoA-transferase subunit A {ECO:0000313|EMBL:AEK59996.1}; EC=2.8.3.6 {ECO:0000313|EMBL:AEK59996.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
3-oxoadipate CoA-transferase subunit A Tax=Pusillimonas noertemannii RepID=UPI0003060D1B
PLM3_127_b2_sep16_scaffold_6162_3
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1651..2310
DNA (660bp) protein (220aa)
pcaJ; 3-oxoadipate CoA-transferase subunit B (EC:2.8.3.6)
3-oxoadipate CoA-transferase subunit B Tax=Herbaspirillum frisingense GSF30 RepID=R0FYS8_9BURK
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_6162_4
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2480..3151
DNA (672bp) protein (224aa)
Uncharacterized protein Tax=Microvirga sp. WSM3557 RepID=I4YML9_9RHIZ
conserved exported hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM3_127_b2_sep16_scaffold_6162_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3256..4356
DNA (1101bp) protein (367aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI00037860EB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_6162_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4381..5346
DNA (966bp) protein (322aa)
Uncharacterized protein Tax=Acidovorax sp. CF316 RepID=J1EGQ0_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_6162_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5888..6337
DNA (450bp) protein (150aa)
Peptidase, M24 family Tax=Aeromicrobium marinum DSM 15272 RepID=E2SAS6_9ACTO
peptidase M24
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_6162_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6382..6825
DNA (444bp) protein (148aa)
Putative aminopeptidase; putative Proline or Methionine dipeptidase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M24
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6162_9
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6932..7957
DNA (1026bp) protein (342aa)
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EIU7_9RHIZ
pyruvate dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_6162_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7945..8937
DNA (993bp) protein (331aa)
Acetoin dehydrogenase E1 component beta-subunit Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IYL8_POLGS
acetoin dehydrogenase E1 component subunit beta
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6162_11
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8957..9196
DNA (240bp) protein (80aa)
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF33_RHOM4
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_6162_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9214..10161
DNA (948bp) protein (316aa)
6-phosphogluconate dehydrogenase, NAD-binding protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQ87_NOCSJ
6-phosphogluconate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6162_13
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10395..10841
DNA (447bp) protein (149aa)
Putative uncharacterized protein Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y716_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
PLM3_127_b2_sep16_scaffold_6162_14
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10859..11272)
DNA (414bp) protein (138aa)
Two component transcriptional regulator, Fis family Tax=Methylovorus sp. (strain MP688) RepID=E4QJ84_METS6
two component Fis family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
PLM3_127_b2_sep16_scaffold_6162_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11467..12906)
DNA (1440bp) protein (480aa)
Sensor histidine kinase PrrB (RegB) Tax=Nitrosospira sp. APG3 RepID=M5DHG0_9PROT
Sensor histidine kinase PrrB (RegB) {ECO:0000313|EMBL:CCU61763.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
periplasmic sensor signal transduction histidine kinase
PLM3_127_b2_sep16_scaffold_6162_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13233..14210
DNA (978bp) protein (326aa)
Putative uncharacterized protein Tax=Variovorax paradoxus (strain S110) RepID=C5CUT5_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS18513.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
PLM3_127_b2_sep16_scaffold_6162_17
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14220..15182
DNA (963bp) protein (321aa)
Putative uncharacterized protein Tax=Hylemonella gracilis ATCC 19624 RepID=F3KT49_9BURK
hypothetical protein
Tax=GWA2_Curvibacter_64_110_curated
PLM3_127_b2_sep16_scaffold_6162_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15222..15878
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQ71_NOCSJ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6162_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15908..16606
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12H60_POLSJ
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_6162_20
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16620..17825
DNA (1206bp) protein (402aa)
3-oxoadipyl-CoA thiolase Tax=Herbaspirillum sp. CF444 RepID=J3DFG7_9BURK
paaJ; beta-ketoadipyl CoA thiolase
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_6162_21
unknown

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comp(18030..18266)
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6162_22
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18394..18534)
DNA (141bp) protein (47aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6ADW5_9PROT
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
Displaying 22 items

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