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PLM3_127_b2_sep16_scaffold_4169

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4169_1
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1000)
DNA (999bp) protein (333aa)
ABC transporter related protein Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB34_NITMU
ABC transporter-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_4169_2
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1101..2777
DNA (1677bp) protein (559aa)
iron ABC transporter permease Tax=Cupriavidus sp. WS RepID=UPI00037B39E5
Ferric iron ABC transporter, permease protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_4169_3
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2818..3864)
DNA (1047bp) protein (349aa)
iron deficiency-induced protein A Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00037F064C
fbpA; iron(iii)-binding periplasmic protein precursor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_4169_4
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4008..4466)
DNA (459bp) protein (153aa)
NLP/P60 protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNX7_SIDLE
NLP/P60 protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_4169_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4641..6641
DNA (2001bp) protein (667aa)
DinG family ATP-dependent helicase YoaA Tax=Nitrosospira sp. APG3 RepID=M5DRY7_9PROT
helicase c2
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_4169_6
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6622..7383)
DNA (762bp) protein (254aa)
Outer membrane protein assembly factor BamD Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RM95_ACCPU
outer membrane assembly lipoprotein YfiO
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_4169_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7418..8326
DNA (909bp) protein (303aa)
pseudouridine synthase RluD (EC:4.2.1.70)
Pseudouridine synthase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7K0_NITMU
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_4169_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8329..9063
DNA (735bp) protein (245aa)
Putative uncharacterized protein Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NVZ9_CHRVO
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_4169_9
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9067..9828
DNA (762bp) protein (254aa)
Zinc/iron permease Tax=Sulfuricella denitrificans skB26 RepID=S6ACK4_9PROT
zinc/iron permease
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_4169_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9924..10589)
DNA (666bp) protein (222aa)
dehydrogenase Tax=Rhodopseudomonas sp. B29 RepID=UPI0003467F48
short-chain dehydrogenase/reductase SDR
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_4169_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10629..11069)
DNA (441bp) protein (147aa)
phosphohistidine phosphatase Tax=Methyloversatilis universalis RepID=UPI00037485F7
phosphohistidine phosphatase
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_4169_12
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11184..11399
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6T0_NITMU
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_4169_13
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11430..12830)
DNA (1401bp) protein (467aa)
Serine/threonine protein kinase Tax=Methyloversatilis universalis FAM5 RepID=F5RFA4_9RHOO
serine/threonine protein kinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_4169_14
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12839..13276)
DNA (438bp) protein (146aa)
Ferric uptake regulator, Fur family Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBT8_NITMU
ferric uptake regulator family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_4169_15
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13369..13704
DNA (336bp) protein (112aa)
Outer membrane protein assembly factor BamE Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HJ0_DECAR
putative outer membrane lipoprotein OmlA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_4169_16
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13734..14498
DNA (765bp) protein (255aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase Tax=Nitrosospira sp. APG3 RepID=M5DPN3_9PROT
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_4169_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14562..16637)
DNA (2076bp) protein (692aa)
Adenylate/guanylate cyclase family protein,protein kinase family protein Tax=Polaromonas sp. CF318 RepID=J3D5D8_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_4169_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16637..18382)
DNA (1746bp) protein (582aa)
PAS domain S-box Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QU67_NOSS7
PAS domain-containing protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_4169_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18632..19246
DNA (615bp) protein (205aa)
Carbamoyl-phosphate synthase small chain Tax=Burkholderia sp. YI23 RepID=G8M5N6_9BURK
carA; carbamoyl-phosphate synthase small chain
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_4169_20
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19264..19725
DNA (462bp) protein (154aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
carbamoyl phosphate synthase small subunit, partial Tax=Ideonella sp. B508-1 RepID=UPI0003B3D36B
carA; carbamoyl phosphate synthase, small subunit
Displaying 20 items

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