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PLM3_127_b2_sep16_scaffold_1299

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1299_1
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1620
DNA (1620bp) protein (540aa)
coxL; carbon monoxide dehydrogenase (EC:1.2.99.2)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI0003670E63
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_1299_2
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1682..2839)
DNA (1158bp) protein (386aa)
acyl-CoA dehydrogenase-like protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM3_127_b2_sep16_scaffold_1299_3
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2873..4087)
DNA (1215bp) protein (405aa)
MFS transporter Tax=Caldimonas manganoxidans RepID=UPI00037EC4C7
MFS transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM3_127_b2_sep16_scaffold_1299_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4139..4927)
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=Pseudomonas stutzeri MF28 RepID=U3HT15_PSEST
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_1299_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5185..6360)
DNA (1176bp) protein (392aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI00037892DB
luciferase-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1299_6
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6671..8578
DNA (1908bp) protein (636aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein bin=GWC2_Syntrophus__56_31 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
diguanylate cyclase/phosphodiesterase with extracellular sensor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_1299_7
unknown

Not on your lists

comp(8640..8795)
DNA (156bp) protein (52aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1299_8
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8956..9978
DNA (1023bp) protein (341aa)
MFS transporter Tax=Cupriavidus sp. HPC(L) RepID=V2IJK4_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_1299_9
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9995..10882
DNA (888bp) protein (296aa)
Putative maleylpyruvate isomerase Tax=Streptomyces ambofaciens ATCC 23877 RepID=A3KJW3_STRAM
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_1299_10
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11008..11979
DNA (972bp) protein (324aa)
ABC transporter substrate-binding protein Tax=Cupriavidus sp. HPC(L) RepID=V2J7R7_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_1299_11
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11984..12475
DNA (492bp) protein (164aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Cystobacter fuscus DSM 2262 RepID=S9QUQ6_9DELT
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_1299_12
Yersinia mollaretii, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12472..13461
DNA (990bp) protein (330aa)
Alcohol dehydrogenase zinc-binding domain protein Tax=Yersinia mollaretii ATCC 43969 RepID=C4SIK1_YERMO
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EEQ08624.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia mollaretii ATCC 43969.;"
Oxidoreductase, zinc-binding dehydrogenase family protein
PLM3_127_b2_sep16_scaffold_1299_13
unknown

Not on your lists

13466..14815
DNA (1350bp) protein (450aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1299_14
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14808..15536
DNA (729bp) protein (243aa)
Ribulose-5-phosphate 4-epimerase (EC:4.1.1.-)
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia sp. BT03 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_1299_15
unknown

Not on your lists

comp(15596..15823)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1299_16
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15905..16759)
DNA (855bp) protein (285aa)
Putative TIM-barrel fold metal-dependent hydrolase Tax=Herbaspirillum sp. YR522 RepID=J3CPC0_9BURK
amidohydrolase family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_1299_17
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16756..17715)
DNA (960bp) protein (320aa)
Uncharacterized protein Tax=Polaromonas sp. CF318 RepID=J2KW48_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL77233.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1299_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17779..18699
DNA (921bp) protein (307aa)
ABC transporter substrate-binding protein Tax=Cupriavidus sp. WS RepID=UPI00037E6898
bug72; hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
Displaying 18 items

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