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PLM3_127_b2_sep16_scaffold_3823

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3823_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..545
DNA (543bp) protein (181aa)
Uncharacterized protein bin=GWC2_Syntrophus__56_31 species=Cupriavidus sp. HMR-1 genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3823_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(542..916)
DNA (375bp) protein (125aa)
hypothetical protein Tax=Rhizobium sp. (strain BR816) RepID=UPI00037ACCBC
enodribonuclease L-PSP
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3823_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(913..1326)
DNA (414bp) protein (138aa)
histidine kinase (EC:2.7.13.3)
Response receiver sensor diguanylate cyclase/phosphodiesterase, PAS domain-containing Tax=Thauera sp. 63 RepID=N6YAZ4_9RHOO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3823_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1323..1874)
DNA (552bp) protein (184aa)
ATP--cobalamin adenosyltransferase Tax=Methyloversatilis sp. NVD RepID=UPI00036827CA
btuR_cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3823_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1881..3101)
DNA (1221bp) protein (407aa)
xseA; exodeoxyribonuclease VII, large subunit (EC:3.1.11.6)
exodeoxyribonuclease VII large subunit Tax=Burkholderia thailandensis RepID=UPI0002DFC495
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3823_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3412..4020
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=Massilia timonae CCUG 45783 RepID=K9DQD6_9BURK
MotA/TolQ/ExbB proton channel
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3823_7
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4017..4433
DNA (417bp) protein (139aa)
Biopolymer transport protein ExbD/TolR Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YA90_NITMU
biopolymer transport protein ExbD/TolR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_3823_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4433..5410
DNA (978bp) protein (326aa)
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YHP8_METFJ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_3823_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5379..5573
DNA (195bp) protein (65aa)
lpxK; tetraacyldisaccharide-1-P 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=LPXK_NITEU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3823_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5570..6295
DNA (726bp) protein (242aa)
3-deoxy-manno-octulosonate cytidylyltransferase Tax=Azoarcus toluclasticus RepID=UPI000365F0CB
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3823_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6292..6945
DNA (654bp) protein (218aa)
Adenylate kinase Tax=Limnobacter sp. MED105 RepID=A6GTS3_9BURK
adenylate kinase family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3823_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6976..9051
DNA (2076bp) protein (692aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump Tax=Dechloromonas aromatica (strain RCB) RepID=Q47B48_DECAR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3823_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9051..10661
DNA (1611bp) protein (537aa)
ggt; gamma-glutamyltranspeptidase (EC:2.3.2.2)
Gamma-glutamyltranspeptidase Tax=Bordetella bronchiseptica 253 RepID=K4QR33_BORBO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3823_14
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10707..13730
DNA (3024bp) protein (1008aa)
Similar to ATP dependent transcriptional activator bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_3823_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13797..14267
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Polaromonas sp. CF318 RepID=J3D2X1_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3823_16
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14272..14475
DNA (204bp) protein (68aa)
Putative uncharacterized protein Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVS8_9FIRM
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_3823_17
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14452..14931)
DNA (480bp) protein (160aa)
carbohydrate kinase, thermoresistant glucokinase (EC:2.7.1.12)
Gluconate kinase Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IYW4_RHOP2
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_3823_18
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14928..15839)
DNA (912bp) protein (304aa)
6-phosphogluconate dehydrogenase Tax=Chitiniphilus shinanonensis RepID=UPI000363B988
6-phosphogluconate dehydrogenase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_3823_19
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15867..16772)
DNA (906bp) protein (302aa)
miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase Tax=Ralstonia solanacearum CMR15 RepID=D8N7H9_RALSL
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM3_127_b2_sep16_scaffold_3823_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16776..17501)
DNA (726bp) protein (242aa)
oxidoreductase Tax=Herbaspirillum sp. JC206 RepID=UPI000304B3F6
Short chain dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3823_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17512..19194)
DNA (1683bp) protein (561aa)
DNA mismatch repair protein MutL Tax=Methyloversatilis sp. NVD RepID=UPI0003808966
DNA mismatch repair protein MutL
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying 21 items

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