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PLM3_127_b2_sep16_scaffold_9588

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_9588_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..123
DNA (123bp) protein (41aa)
AMP-dependent synthetase and ligase Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J6B9_POLGS
AMP-dependent synthetase/ligase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_9588_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113..970
DNA (858bp) protein (286aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI0002F825CA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_9588_3
unknown

Not on your lists

comp(965..1261)
DNA (297bp) protein (99aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_9588_4
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1357..2049
DNA (693bp) protein (231aa)
RTCB protein Tax=Lamprocystis purpurea RepID=UPI0003608237
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_9588_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2049..2510
DNA (462bp) protein (154aa)
Putative uncharacterized protein Tax=Thiocapsa marina 5811 RepID=F9UFB6_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_9588_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2513..3031
DNA (519bp) protein (173aa)
Catechol 1,2-dioxygenase Tax=Fibrisoma limi BUZ 3 RepID=I2GCL0_9BACT
Dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_9588_7
unknown

Not on your lists

3009..3431
DNA (423bp) protein (141aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_9588_8
Bacillus simplex, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3447..4439)
DNA (993bp) protein (331aa)
nicX; 2,5-dihydroxypyridine 5,6-dioxygenase (EC:1.13.11.9)
hypothetical protein Tax=Brevibacillus sp. phR RepID=UPI000308DF4A
2,5-dihydroxypyridine 5,6-dioxygenase {ECO:0000313|EMBL:CEG33222.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus simplex.;"
PLM3_127_b2_sep16_scaffold_9588_9
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4450..5844)
DNA (1395bp) protein (465aa)
hypothetical protein Tax=Actinoalloteichus spitiensis RepID=UPI000373F22C
SCBAC17F8.16; amidase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_9588_10
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5925..6899
DNA (975bp) protein (325aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI00035C1B5B
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGF69782.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
dctP; TRAP dicarboxylate transporter subunit DctP
PLM3_127_b2_sep16_scaffold_9588_11
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6896..7408
DNA (513bp) protein (171aa)
TRAP dicarboxylate transporter, DctQ subunit Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PMH8_PSEUV
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KEP71139.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava dalianensis.;"
dctQ; TRAP dicarboxylate transporter subunit DctQ
PLM3_127_b2_sep16_scaffold_9588_12
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7442..8374
DNA (933bp) protein (311aa)
C4-dicarboxylate ABC transporter permease Tax=Amorphus coralli RepID=UPI00037AF700
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:EKF18131.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
TRAP large permease DctM subunit
PLM3_127_b2_sep16_scaffold_9588_13
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8371..8514
DNA (144bp) protein (48aa)
TRAP dicarboxylate transporter, DctM subunit Tax=Pseudovibrio RepID=G8PMH9_PSEUV
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:EWH03650.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
dctM; TRAP dicarboxylate transporter subunit DctM
PLM3_127_b2_sep16_scaffold_9588_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8533..9447
DNA (915bp) protein (305aa)
hypothetical protein Tax=Paenibacillus daejeonensis RepID=UPI000377E13D
aldehyde dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_127_b2_sep16_scaffold_9588_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9464..10333)
DNA (870bp) protein (290aa)
Aryl-alcohol dehydrogenase (NADP(+)) Tax=Crinalium epipsammum PCC 9333 RepID=K9VUP7_9CYAN
aldo/keto reductase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_127_b2_sep16_scaffold_9588_16
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10429..11400)
DNA (972bp) protein (324aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI0002D26ECC
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGF69782.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
dctP; TRAP dicarboxylate transporter subunit DctP
PLM3_127_b2_sep16_scaffold_9588_17
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11616..12464
DNA (849bp) protein (283aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI0002F681EA
amidohydrolase 2
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_9588_18
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12465..13142
DNA (678bp) protein (226aa)
Transcriptional regulator, TetR family Tax=Azospirillum brasilense Sp245 RepID=G8B0I9_AZOBR
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AIB16125.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM3_127_b2_sep16_scaffold_9588_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13142..14371
DNA (1230bp) protein (410aa)
monooxygenase Tax=Variovorax paradoxus RepID=UPI000370A690
Variovorax paradoxus strain MEDvA23 contig_45, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29192.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
putative FAD-dependent monooxygenase
PLM3_127_b2_sep16_scaffold_9588_20
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14368..15690
DNA (1323bp) protein (441aa)
Putative hydrolase/peptidase, M24 family Tax=Burkholderia xenovorans (strain LB400) RepID=Q13ZY2_BURXL
metallopeptidase M24 family protein
Putative hydrolase/peptidase, M24 family {ECO:0000313|EMBL:ABE30357.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
PLM3_127_b2_sep16_scaffold_9588_21
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

15702..16661
DNA (960bp) protein (320aa)
Extra-cytoplasmic solute receptor family protein 56 Tax=Cupriavidus basilensis OR16 RepID=H1S4T4_9BURK
extra-cytoplasmic solute receptor family protein 56
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3_127_b2_sep16_scaffold_9588_22
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16661..17464
DNA (804bp) protein (268aa)
Aldo-keto reductase Tax=Patulibacter medicamentivorans RepID=H0EB93_9ACTN
Aldo-keto reductase {ECO:0000313|EMBL:EHN09057.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
aldo/keto reductase
Displaying 22 items

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