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PLM3_127_b2_sep16_scaffold_19111

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_19111_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12..299)
DNA (288bp) protein (96aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_19111_2
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(427..771)
DNA (345bp) protein (115aa)
hypothetical protein bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM3_127_b2_sep16_scaffold_19111_3
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(720..1088)
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Azospirillum brasilense Sp245 RepID=G8AMC6_AZOBR
conserved hypothetical protein; putative signal peptide; putative C-type lectin-like
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM3_127_b2_sep16_scaffold_19111_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1171..1806)
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PE32_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_19111_5
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1893..2810)
DNA (918bp) protein (306aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PE32_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_19111_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2813..4294)
DNA (1482bp) protein (494aa)
Putative uncharacterized protein bin=GWC2_Syntrophus__56_31 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tricarboxylate transport membrane protein TctA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_19111_7
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4291..4539)
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YIV9_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_19111_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4536..4766)
DNA (231bp) protein (77aa)
Putative uncharacterized protein bin=GWC2_Syntrophus__56_31 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
tctB4; small permease of tripartite tricarboxylate transporter
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_19111_9
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4812..5879
DNA (1068bp) protein (356aa)
Homoserine O-acetyltransferase Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VZZ4_9BURK
Homoserine O-acetyltransferase {ECO:0000313|EMBL:EGF31826.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_19111_10
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5964..6233
DNA (270bp) protein (90aa)
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_19111_11
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6214..6636
DNA (423bp) protein (141aa)
PilT protein domain protein Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F313_SPICH
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_19111_12
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6651..7073
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Polaromonas sp. CF318 RepID=J3CRU9_9BURK
Bll2215 protein {ECO:0000313|EMBL:CDS49673.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_19111_13
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6992..7279)
DNA (288bp) protein (96aa)
Probable ATP-binding ABC transporter protein Tax=Bordetella bronchiseptica RepID=K0MRC9_BORBM
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_19111_14
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(7291..7614)
DNA (324bp) protein (108aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YW9_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3_127_b2_sep16_scaffold_19111_15
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7611..7799)
DNA (189bp) protein (63aa)
Uncharacterized protein Tax=Pseudomonas aeruginosa RepID=V8E2R6_PSEAI
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 15 items

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