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PLM3_127_b2_sep16_scaffold_5560

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_5560_1
Spiribacter salinus, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..137
-----------------
DNA (135bp)
protein (45aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiribacter.;" source="Spiribacter salinus M19-40.;"
Transcription termination factor Rho Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0ABR5_ALKEH
rho; transcription termination factor Rho
PLM3_127_b2_sep16_scaffold_5560_2
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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223..630
-----------------
DNA (408bp)
protein (136aa)
Uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=GWB2_Chloroflexi_54_36_curated
PLM3_127_b2_sep16_scaffold_5560_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(678..1958)
-----------------
DNA (1281bp)
protein (427aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
phosphoribosylamine--glycine ligase Tax=Thiothrix disciformis RepID=UPI000373E486
Tax=RBG_16_Gamma2_65_34_curated
PLM3_127_b2_sep16_scaffold_5560_4
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2142..3704)
-----------------
DNA (1563bp)
protein (521aa)
IMP cyclohydrolase (EC:3.5.4.10)
Bifunctional purine biosynthesis protein PurH Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E6L9_9GAMM
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source="Thiorhodospira sibirica ATCC 700588.;"
PLM3_127_b2_sep16_scaffold_5560_5

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comp(3701..3991)
-----------------
DNA (291bp)
protein (97aa)
DNA-binding protein Fis Tax=mine drainage metagenome RepID=T0Z963_9ZZZZ
DNA-binding protein Fis {ECO:0000313|EMBL:EQD40592.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
helix-turn-helix Fis-type
PLM3_127_b2_sep16_scaffold_5560_6
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4018..4932)
-----------------
DNA (915bp)
protein (305aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
tRNA-dihydrouridine synthase Tax=Pseudomonas sp. (strain M1) RepID=L1I2P4_PSEUO
tRNA-dihydrouridine synthase B
PLM3_127_b2_sep16_scaffold_5560_7
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5003..6175)
-----------------
DNA (1173bp)
protein (391aa)
Uncharacterized protein Tax=Azotobacter vinelandii RepID=M9YDI1_AZOVI
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_57_12_curated
PLM3_127_b2_sep16_scaffold_5560_8
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6222..7139)
-----------------
DNA (918bp)
protein (306aa)
Ribosomal protein L11 methyltransferase Tax=Alcanivorax pacificus W11-5 RepID=K2HLS4_9GAMM
50S ribosomal protein L11 methyltransferase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
PLM3_127_b2_sep16_scaffold_5560_9
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7154..7957)
-----------------
DNA (804bp)
protein (268aa)
Acetyl-CoA carboxylase, biotin carboxylase subunit Tax=Thiorhodovibrio sp. 970 RepID=H8YYH0_9GAMM
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:EIC23496.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
acetyl-CoA carboxylase, biotin carboxylase
Displaying 9 items

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