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PLM3_127_b2_sep16_scaffold_5852

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_5852_1
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1265)
-----------------
DNA (1263bp)
protein (421aa)
NADH dehydrogenase I chain F {ECO:0000313|EMBL:CDI03112.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CDI03112.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
NADH-quinone oxidoreductase, F subunit (EC:1.6.99.5)
NADH dehydrogenase subunit F Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A780_ALKEH
PLM3_127_b2_sep16_scaffold_5852_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1262..1765)
-----------------
DNA (504bp)
protein (168aa)
NADH-quinone oxidoreductase, E subunit Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L259_HALNC
NADH-quinone oxidoreductase subunit E
NADH-quinone oxidoreductase, E subunit {ECO:0000313|EMBL:ACX96782.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
PLM3_127_b2_sep16_scaffold_5852_3
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1765..3018)
-----------------
DNA (1254bp)
protein (418aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
NADH dehydrogenase subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DKX5_9GAMM
PLM3_127_b2_sep16_scaffold_5852_4
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3011..3706)
-----------------
DNA (696bp)
protein (232aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
NADH-quinone oxidoreductase subunit C Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G3P3_9GAMM
NADH dehydrogenase
PLM3_127_b2_sep16_scaffold_5852_5
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3716..4207)
-----------------
DNA (492bp)
protein (164aa)
NADH dehydrogenase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
NADH-quinone oxidoreductase subunit B Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DKX7_9GAMM
PLM3_127_b2_sep16_scaffold_5852_6
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4198..4554)
-----------------
DNA (357bp)
protein (119aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
NADH-quinone oxidoreductase subunit A Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HG0_THICR
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
PLM3_127_b2_sep16_scaffold_5852_trna_1
unknown

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comp(4611..4692)
-----------------
DNA (82bp)
transferRNA Leu
PLM3_127_b2_sep16_scaffold_5852_7
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4695..5075)
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein Tax=Cycloclasticus RepID=K0C4M6_CYCSP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT67483.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus sp. (strain P1).;"
PLM3_127_b2_sep16_scaffold_5852_8
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5116..5865)
-----------------
DNA (750bp)
protein (250aa)
Triose-phosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Triosephosphate isomerase Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GNY3_THISH
PLM3_127_b2_sep16_scaffold_5852_9
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5968..7254)
-----------------
DNA (1287bp)
protein (429aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
Phosphoglucosamine mutase Tax=Methylomicrobium album BG8 RepID=H8GR68_METAL
glmM; phosphoglucosamine mutase
PLM3_127_b2_sep16_scaffold_5852_10
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7313..7726)
-----------------
DNA (414bp)
protein (138aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase Tax=Pseudomonas avellanae BPIC 631 RepID=K2SL46_9PSED
Displaying 11 items

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