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PLM3_127_b2_sep16_scaffold_6718

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6718_1
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1475
-----------------
DNA (1473bp)
protein (491aa)
DNA polymerase III, tau and gamma subunits DNA elongation factor III {ECO:0000313|EMBL:CDH45061.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDH45061.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
DNA polymerase III subunit tau Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FBW6_9GAMM
hypothetical protein
PLM3_127_b2_sep16_scaffold_6718_2
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

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1495..1818
-----------------
DNA (324bp)
protein (108aa)
Protein belonging to Uncharacterized protein family UPF0133 Tax=mine drainage metagenome RepID=T1DG58_9ZZZZ
conserved hypothetical protein
Nucleoid-associated protein TBH_C1637 {ECO:0000256|HAMAP-Rule:MF_00274}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
PLM3_127_b2_sep16_scaffold_6718_3
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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1850..2449
-----------------
DNA (600bp)
protein (200aa)
Recombination protein RecR Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=RECR_ALKEH
recR; recombination protein RecR
Recombination protein RecR {ECO:0000255|HAMAP-Rule:MF_00017}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
PLM3_127_b2_sep16_scaffold_6718_4
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2446..3393)
-----------------
DNA (948bp)
protein (316aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Putative ribosome biogenesis GTPase RsgA Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GPJ8_THISH
ribosome-associated GTPase
PLM3_127_b2_sep16_scaffold_6718_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3398..4636)
-----------------
DNA (1239bp)
protein (413aa)
Ste24 endopeptidase (EC:3.4.24.84)
peptidase M48 Tax=Thiothrix disciformis RepID=UPI000370E2EE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6718_6
Methylophaga lonarensis, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4705..5277
-----------------
DNA (573bp)
protein (191aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga lonarensis MPL.;"
oligoribonuclease Tax=Arhodomonas aquaeolei RepID=UPI000369E846
oligoribonuclease
PLM3_127_b2_sep16_scaffold_6718_7
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5277..6257
-----------------
DNA (981bp)
protein (327aa)
serine/threonine dehydratase Tax=Sphingomonas sp. KC8 RepID=UPI0002489376
pyridoxal-5'-phosphate-dependent protein subunit beta
Pyridoxal-5'-phosphate-dependent protein subunit beta {ECO:0000313|EMBL:AGH49381.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
PLM3_127_b2_sep16_scaffold_6718_8
unknown

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6254..6358
-----------------
DNA (105bp)
protein (35aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6718_9
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6366..6776
-----------------
DNA (411bp)
protein (137aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00035D3BF2
Glutathione-dependent formaldehyde-activating, GFA {ECO:0000313|EMBL:KGQ17907.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_6718_10
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6962..7156)
-----------------
DNA (195bp)
protein (65aa)
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase Tax=Neisseria polysaccharea ATCC 43768 RepID=E2PHM3_NEIPO
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_42_43_curated
Displaying 10 items

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