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PLM3_127_b2_sep16_scaffold_21731

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_21731_1
Spongiibacter sp. IMCC21906, Spongiibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..431)
-----------------
DNA (429bp)
protein (143aa)
ATP-dependent helicase HrpB {ECO:0000313|EMBL:AKH69175.1}; EC=3.6.4.13 {ECO:0000313|EMBL:AKH69175.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Spongiibacter.;" source="Spongiibacter sp. IMCC21906.;"
ATP-dependent helicase Tax=Spongiibacter tropicus RepID=UPI0003B48DA4
ATP-dependent helicase HrpB
PLM3_127_b2_sep16_scaffold_21731_2
unknown

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comp(804..1313)
-----------------
DNA (510bp)
protein (170aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_21731_3
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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1467..2639
-----------------
DNA (1173bp)
protein (391aa)
Uncharacterized protein Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z8A7_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:KEZ78265.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_21731_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2648..3343)
-----------------
DNA (696bp)
protein (232aa)
Male sterility domain Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRE5_PARL1
hypothetical protein
Male sterility domain {ECO:0000313|EMBL:ABS62478.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
PLM3_127_b2_sep16_scaffold_21731_5
Oryza brachyantha, Oryza, Poales, commelinids, Streptophyta, Viridiplantae

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3430..3921
-----------------
DNA (492bp)
protein (164aa)
Uncharacterized protein Tax=Oryza brachyantha RepID=J3M371_ORYBR
Uncharacterized protein {ECO:0000313|EnsemblPlants:OB05G10450.1}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza.;" source="Oryza brachyantha.;"
cytoplasmic membrane protein
PLM3_127_b2_sep16_scaffold_21731_6
unknown

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4031..4240
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_21731_7
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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4268..5767
-----------------
DNA (1500bp)
protein (500aa)
hypothetical protein Tax=Microbulbifer variabilis RepID=UPI00036F9530
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU98123.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 /; SA1).;"
PLM3_127_b2_sep16_scaffold_21731_8

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comp(5752..6561)
-----------------
DNA (810bp)
protein (270aa)
Putative uncharacterized protein Tax=Bacteria RepID=Q6SGP4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKO09003.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_21731_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(6558..7553)
-----------------
DNA (996bp)
protein (332aa)
hypothetical protein Tax=Microbulbifer agarilyticus RepID=UPI0002559474
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_127_b2_sep16_scaffold_21731_10
gamma proteobacterium HIMB55, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7550..7657)
-----------------
DNA (108bp)
protein (36aa)
von Willebrand factor type A-like protein Tax=gamma proteobacterium HIMB55 RepID=H3NVF9_9GAMM
von Willebrand factor type A-like protein {ECO:0000313|EMBL:EHQ56364.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium HIMB55.;"
Displaying 10 items

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