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PLM3_127_b2_sep16_scaffold_64426

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_64426_1
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..808)
-----------------
DNA (807bp)
protein (269aa)
hypothetical protein Tax=Enterovibrio norvegicus RepID=UPI000313264E
Protocatechuate 3,4-dioxygenase subunit beta {ECO:0000313|EMBL:ESQ91025.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
protocatechuate 4,5-dioxygenase subunit beta
PLM3_127_b2_sep16_scaffold_64426_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(801..1253)
-----------------
DNA (453bp)
protein (151aa)
Protocatechuate 4,5-dioxygenase alpha chain (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase subunit alpha Tax=gamma proteobacterium BDW918 RepID=I2JIF1_9GAMM
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_64426_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1268..1582)
-----------------
DNA (315bp)
protein (105aa)
Dicarboxylic acid hydrolase Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DLJ5_BRAJP
2-pyrone-4,6-dicarboxylate hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_64426_4
unknown

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2293..2643
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_64426_5

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comp(2840..3328)
-----------------
DNA (489bp)
protein (163aa)
OmpA domain protein transmembrane region-containing protein Tax=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) RepID=A8GZP7_SHEPA
Uncharacterized protein {ECO:0000313|EMBL:KKN91934.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
OmpA domain-containing protein
PLM3_127_b2_sep16_scaffold_64426_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3607..4146
-----------------
DNA (540bp)
protein (180aa)
Uncharacterized protein Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G768_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO56036.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_64426_7
unknown

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comp(4192..4260)
-----------------
DNA (69bp)
protein (23aa)

This feature has no annotations

Displaying 7 items

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