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PLM3_127_b2_sep16_scaffold_14283_3

Organism: PLM3_127_b2_sep16_Gammaproteobacteria_64_8

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1675..2613)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.0
  • Coverage: 296.0
  • Bit_score: 292
  • Evalue 4.10e-76
tRNA pseudouridine synthase B Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000370D132 similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 294.0
  • Bit_score: 289
  • Evalue 2.50e-75
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 293.0
  • Bit_score: 289
  • Evalue 9.20e-76

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Taxonomy

Thiorhodococcus sp. AK35 → Thiorhodococcus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGAGCGATCAGATTGCCATCGACGGCATCGTGTTGCTCGACAAGCCATTCGGATTGAGTTCGAACGCCGCCCTGCAACGGGTGAAAAGAGCATACCGGGCGCAGAAGGCGGGTCACACGGGCAGTCTCGATCCCCTGGCCAGTGGCATGCTGCCGATCTGCCTCGGCGAAGCCACGAAGCTCTCAAGCGTGCTGCTCGATGCCCACAAAAAGTACCGCTTTACCGTCAAGCTCGGTGTGCGTACGACTACCGGCGACCTCGAAGGGGAGGTGGCGGAGCGATGCGCGGTACCGAGTCTGGACCTGCTCGCGGTGAACGACGTATTGGCGAAATTCGTTGGCCGGCGTCAACAAGTTCCGCCGATGCACTCGGCACTCAAGCACCGCGGCAAGCCGCTGTACGAGCTGGCCCGACGCGGCGTGGAGATCGAACGGACAGGACGCACCATCGAAATTACGGCTCTCGAGATCGAGAATCTCGGTCCCGATTCGATCAAGCTTCGGATCCGGTGCTCCAAGGGCACGTACGTGCGCAGTCTGGCGGAGGACATCGCAGAGGCGCTGGGTACCTGTGGGCATGTGAGTGAGTTGCGACGCCTGGGTGTCGATCCCTTCATGGATGAGCCGATGGTCGAGCTCGACCAACTCGAAGCGACAGCCGTCGGCGATCGTGCTGAGCTCGCTGCGTGGCTGATGCCGCCAGATCGGGCAGTCGCCGACTGGCCGCACGTCGAGTTGACAGCCGAACTCGCCGCGCGACTTCTCAATGGGCAGAGCGTTTCGCTGGCGTCATCCCGGACTCCACCCGGTGCGGTGCGCGTCTACGGACCCGAGCGGGGTTTTCTCGGCCTTGGTGACGTCGACGCCGAGCAGAATCTCAAGCCGCGGCGCCTGATCGCAGCGCCCACTTGGCTTGTGAGGCTTTCGGCCAGCGGTTAG
PROTEIN sequence
Length: 313
MSDQIAIDGIVLLDKPFGLSSNAALQRVKRAYRAQKAGHTGSLDPLASGMLPICLGEATKLSSVLLDAHKKYRFTVKLGVRTTTGDLEGEVAERCAVPSLDLLAVNDVLAKFVGRRQQVPPMHSALKHRGKPLYELARRGVEIERTGRTIEITALEIENLGPDSIKLRIRCSKGTYVRSLAEDIAEALGTCGHVSELRRLGVDPFMDEPMVELDQLEATAVGDRAELAAWLMPPDRAVADWPHVELTAELAARLLNGQSVSLASSRTPPGAVRVYGPERGFLGLGDVDAEQNLKPRRLIAAPTWLVRLSASG*