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PLM3_127_b2_sep16_scaffold_17792

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_17792_1
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

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242..352
DNA (111bp) protein (37aa)
PAS domain S-box bin=GWC2_Nitrospirae-rel_56_14 species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_57_9_curated
PLM3_127_b2_sep16_scaffold_17792_2
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

543..2798
DNA (2256bp) protein (752aa)
PAS/PAC sensor hybrid histidine kinase bin=bin5_DeltaP species=Zavarzinella formosa genus=Zavarzinella taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
PAS/PAC sensor hybrid histidine kinase
Tax=CSP1_8_Deltaproteobacteria
PLM3_127_b2_sep16_scaffold_17792_3
unknown

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comp(2897..3301)
DNA (405bp) protein (135aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_17792_4
unknown

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comp(3320..3490)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_17792_5
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

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comp(3772..4725)
DNA (954bp) protein (318aa)
Glucose-1-phosphate thymidylyltransferase bin=GWA2_Elusimicrobia_69_24 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
glucose-1-phosphate thymidylyltransferase
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
PLM3_127_b2_sep16_scaffold_17792_6

Not on your lists

comp(4962..5525)
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK54511.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3_127_b2_sep16_scaffold_17792_7
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5577..5888)
DNA (312bp) protein (104aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YEN6_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX29030.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
plasmid stabilization system protein
PLM3_127_b2_sep16_scaffold_17792_8
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(5885..6106)
DNA (222bp) protein (74aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3_127_b2_sep16_scaffold_17792_9
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

6338..7117
DNA (780bp) protein (260aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=APT_ACIC5
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3_127_b2_sep16_scaffold_17792_10
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

comp(7450..8673)
DNA (1224bp) protein (408aa)
Putative PAS/PAC sensor protein Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R7Q1_SPISS
PAS/PAC sensor protein
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
PLM3_127_b2_sep16_scaffold_17792_11
unknown

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comp(9269..9496)
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying 11 items

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