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PLM3_127_b2_sep16_scaffold_31843

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_31843_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(132..842)
DNA (711bp) protein (237aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
demethylmenaquinone methyltransferase (EC:2.1.1.-)
Demethylmenaquinone methyltransferase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q14_SOLUE
PLM3_127_b2_sep16_scaffold_31843_2
Synechococcus sp. JA-2-3B'a(2-13), Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(829..1488)
DNA (660bp) protein (220aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium; Yellowstone B-Prime).;"
3-dehydroquinate synthase Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JHG6_SYNJB
PLM3_127_b2_sep16_scaffold_31843_3
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1485..1991)
DNA (507bp) protein (169aa)
3-dehydroquinate synthase bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
aroB; 3-dehydroquinate synthase
Tax=GWA2_Deltaproteobacteria_45_12_curated
PLM3_127_b2_sep16_scaffold_31843_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2415..4043
DNA (1629bp) protein (543aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
L-aspartate oxidase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
L-aspartate oxidase
PLM3_127_b2_sep16_scaffold_31843_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4230..5048)
DNA (819bp) protein (273aa)
Glycosyl hydrolase family 88 Tax=Pedosphaera parvula Ellin514 RepID=B9XB65_9BACT
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:EEF62750.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
glycosyl hydrolase
PLM3_127_b2_sep16_scaffold_31843_6
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(5711..6103)
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IKN2_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB62277.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_31843_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(6113..7075)
DNA (963bp) protein (321aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003761C1B
von Willebrand factor type A domain {ECO:0000313|EMBL:CDM65801.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Mg-chelatase subunit ChlD
PLM3_127_b2_sep16_scaffold_31843_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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7347..8360
DNA (1014bp) protein (338aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003759220
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3_127_b2_sep16_scaffold_31843_9
RLO_RIF05_58_11, RIF5, Bacteria

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comp(8427..9509)
DNA (1083bp) protein (361aa)
Probable acetyl xylan esterase Tax=Planctomyces maris DSM 8797 RepID=A6C832_9PLAN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM3_127_b2_sep16_scaffold_31843_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(9618..10589)
DNA (972bp) protein (324aa)
UDP-galactose 4-epimerase {ECO:0000313|EMBL:ABF40703.1}; EC=5.1.3.2 {ECO:0000313|EMBL:ABF40703.1};; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000369EF41
UDP-galactose 4-epimerase
Displaying 10 items

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