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PLM3_127_b2_sep16_scaffold_3759

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3759_1
unknown

Not on your lists

comp(2..331)
DNA (330bp) protein (110aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3759_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(373..1377)
DNA (1005bp) protein (335aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037310DC
polysaccharide export protein
Polysaccharide export protein {ECO:0000313|EMBL:ABJ85597.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_127_b2_sep16_scaffold_3759_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1451..2011)
DNA (561bp) protein (187aa)
transcription termination factor NusG domain protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin3_NC10 organism_group=NC10
transcription termination factor NusG domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_3759_4
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(2008..3318)
DNA (1311bp) protein (437aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:AEH45078.1}; EC=1.1.1.22 {ECO:0000313|EMBL:AEH45078.1};; species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812).;"
Nucleotide sugar dehydrogenase Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A8J2_THEID
PLM3_127_b2_sep16_scaffold_3759_5
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3411..4283)
DNA (873bp) protein (291aa)
Polysaccharide biosynthesis protein, putative bin=GWF2_Geobacter_54_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
polysaccharide biosynthesis protein, regulator
Tax=CG_Delta_01
PLM3_127_b2_sep16_scaffold_3759_6
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4294..4803)
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YFW1_9BACT
exeA; type II secretion system ATPase ExeA
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM3_127_b2_sep16_scaffold_3759_7
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4785..5156)
DNA (372bp) protein (124aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YJF0_9DELT
general secretion pathway protein-like protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM3_127_b2_sep16_scaffold_3759_8
Pseudomonas sp. GM78, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5170..6504)
DNA (1335bp) protein (445aa)
Uncharacterized protein Tax=Pseudomonas sp. GM78 RepID=J2X197_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJN24787.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM78.;"
lipopolysaccharide biosynthesis protein
PLM3_127_b2_sep16_scaffold_3759_9
unknown

Not on your lists

comp(6543..7022)
DNA (480bp) protein (160aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3759_10
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7060..8094)
DNA (1035bp) protein (345aa)
two component, sigma54 specific, Fis family transcriptional regulator bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
two component sigma54 specific Fis family transcriptional regulator
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM3_127_b2_sep16_scaffold_3759_11
unknown

Not on your lists

comp(8422..8754)
DNA (333bp) protein (111aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3759_12
unknown

Not on your lists

9113..9619
DNA (507bp) protein (169aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3759_13
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9624..10940)
DNA (1317bp) protein (439aa)
sulfate adenylyltransferase large subunit (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
Sulfate adenylyltransferase, large subunit Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PU59_STANL
PLM3_127_b2_sep16_scaffold_3759_14
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10940..11920)
DNA (981bp) protein (327aa)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
Sulfate adenylyltransferase, small subunit Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y8A7_THEBD
sulfate adenylyltransferase
PLM3_127_b2_sep16_scaffold_3759_15
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(11928..12683)
DNA (756bp) protein (252aa)
phosphoadenylylsulfate reductase (EC:1.8.4.8)
Phosphoadenylylsulfate reductase (Thioredoxin) bin=GWB2_Bacteroidetes_32_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
Tax=BJP_IG2103_Bacteroidetes_41_9
PLM3_127_b2_sep16_scaffold_3759_16
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

12875..13312
DNA (438bp) protein (146aa)
Rrf2 family transcriptional regulator Tax=Oscillochloris trichoides DG-6 RepID=E1I9V6_9CHLR
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:EFO81958.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
BadM/Rrf2 family transcriptional regulator
PLM3_127_b2_sep16_scaffold_3759_17
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13323..14276
DNA (954bp) protein (318aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
Cysteine synthase Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D5S3_PELTS
CysK; cysteine synthase
PLM3_127_b2_sep16_scaffold_3759_18
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14409..15272
DNA (864bp) protein (288aa)
ABC transporter related protein Tax=Pelosinus RepID=I8RH14_9FIRM
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:EIW18968.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
PLM3_127_b2_sep16_scaffold_3759_19
RHI_Planctomycetes_42_15, Planctomycetes, Bacteria

Not on your lists

15250..15963
DNA (714bp) protein (238aa)
ABC transporter permease component bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
TauC; ABC-type nitrate/sulfonate/bicarbonate transport systemM permease component
Tax=RIFCSPHIGHO2_12_Planctomycetes_42_15_curated
PLM3_127_b2_sep16_scaffold_3759_20
unknown

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comp(15911..16042)
DNA (132bp) protein (44aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3759_21
unknown

Not on your lists

comp(16035..16358)
DNA (324bp) protein (108aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3759_22
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16509..17756)
DNA (1248bp) protein (416aa)
hypothetical protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM3_127_b2_sep16_scaffold_3759_23
unknown

Not on your lists

18133..18279
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3759_24
unknown

Not on your lists

comp(18813..19226)
DNA (414bp) protein (138aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3759_25
unknown

Not on your lists

19266..19526
DNA (261bp) protein (87aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3759_26
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(19499..20587)
DNA (1089bp) protein (363aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=QUEA_HELMI
queA; s-adenosylmethionine:tRNA ribosyltransferase-isomerase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3_127_b2_sep16_scaffold_3759_27
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20623..21789
DNA (1167bp) protein (389aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YF11_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX29155.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_3759_28
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

21875..22324
DNA (450bp) protein (150aa)
Heat shock protein Hsp20 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML01_9BACT
Heat shock protein Hsp20
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
PLM3_127_b2_sep16_scaffold_3759_29
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

22441..23304
DNA (864bp) protein (288aa)
ClpA; ATPase with chaperone activity, ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB bin=bin7_NC10_sister species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin7_NC10_sister organism_group=NC10
clpB; ATP-dependent chaperone ClpB
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_3759_30
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23342..23926
DNA (585bp) protein (195aa)
ATP-dependent chaperone ClpB Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCS7_DESAR
ATP-dependent chaperone ClpB
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
Displaying items 1-30 of 35 in total

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