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PLM3_127_b2_sep16_scaffold_4131

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4131_1
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(519..2234)
DNA (1716bp) protein (572aa)
Uncharacterized protein Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZL95_TERRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL90013.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
PLM3_127_b2_sep16_scaffold_4131_2
unknown

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2419..2835
DNA (417bp) protein (139aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4131_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(2805..3872)
DNA (1068bp) protein (356aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035C5373
TonB-dependent receptor
Uncharacterized protein {ECO:0000313|EMBL:ABJ88418.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_127_b2_sep16_scaffold_4131_4
unknown

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4103..4294
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4131_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4269..4490
DNA (222bp) protein (74aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQY8_KORVE
WD40-like beta Propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AHG93441.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_4131_6
unknown

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4692..5222
DNA (531bp) protein (177aa)
hypothetical protein
PLM3_127_b2_sep16_scaffold_4131_7
unknown

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5268..5453
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4131_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(5549..6940)
DNA (1392bp) protein (464aa)
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains bin=CNBR_ACIDO species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_127_b2_sep16_scaffold_4131_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(6985..8121)
DNA (1137bp) protein (379aa)
signal transduction histidine kinase, nitrogen specific, NtrB bin=CNBR_ACIDO species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_127_b2_sep16_scaffold_4131_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(8460..8939)
DNA (480bp) protein (160aa)
Histidine triad (HIT) protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHJ0_KORVE
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:CDM65479.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
histidine triad (HIT) protein
PLM3_127_b2_sep16_scaffold_4131_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(8942..9235)
DNA (294bp) protein (98aa)
Bacterial nucleoid protein Hbs Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ45_KORVE
nucleoid protein Hbs
Bacterial nucleoid protein Hbs {ECO:0000313|EMBL:ABF43105.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3_127_b2_sep16_scaffold_4131_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(9364..10272)
DNA (909bp) protein (303aa)
Signal peptide peptidase A Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ44_KORVE
signal peptide peptidase SppA
Signal peptide peptidase A {ECO:0000313|EMBL:ABF43106.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3_127_b2_sep16_scaffold_4131_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(10536..11315)
DNA (780bp) protein (260aa)
hypothetical protein bin=CNBR_ACIDO species=Nematostella vectensis genus=Nematostella taxon_order=Actiniaria taxon_class=Anthozoa phylum=Cnidaria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
MIP family channel protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_127_b2_sep16_scaffold_4131_14
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(11440..12444)
DNA (1005bp) protein (335aa)
DNA polymerase III subunit delta Tax=Bacillus sp. 123MFChir2 RepID=UPI000380FF5E
DNA polymerase III subunit delta {ECO:0000313|EMBL:KIL37183.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
holA; DNA polymerase III subunit delta
PLM3_127_b2_sep16_scaffold_4131_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(12842..13336)
DNA (495bp) protein (165aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI00037EA4AE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3_127_b2_sep16_scaffold_4131_16
unknown

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comp(13452..13745)
DNA (294bp) protein (98aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4131_17
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(13852..14730)
DNA (879bp) protein (293aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
Leucine--tRNA ligase Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G3N9_CHLAD
leucyl-tRNA synthetase
Displaying 17 items

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