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PLM3_127_b2_sep16_scaffold_9519

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_9519_1
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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3..524
DNA (522bp) protein (174aa)
TonB family protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AZ3_SOLUE
TonB family protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3_127_b2_sep16_scaffold_9519_2
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(585..2285)
DNA (1701bp) protein (567aa)
Amino acid permease-associated region bin=GWA2_Ignavibacteria_55_11 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
amino acid permease
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM3_127_b2_sep16_scaffold_9519_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2510..3082)
DNA (573bp) protein (191aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
UvrD/REP helicase bin=GWC2_Nitrospirae_57_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
ATP-dependent DNA helicase UvrD/PcrA
PLM3_127_b2_sep16_scaffold_9519_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(3127..4755)
DNA (1629bp) protein (543aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037EB3D7
ATP-dependent DNA helicase Rep
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3_127_b2_sep16_scaffold_9519_5
unknown

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4825..5052
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_9519_6
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5003..5881
DNA (879bp) protein (293aa)
Metal dependent phosphohydrolase Tax=Geobacter sp. (strain M18) RepID=E8WI35_GEOS8
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ADW15660.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM3_127_b2_sep16_scaffold_9519_7
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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5922..7082
DNA (1161bp) protein (387aa)
TonB family C-terminal domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGE2_CHLTF
TonB family C-terminal domain-containing protein
TonB family C-terminal domain protein {ECO:0000313|EMBL:AEP10902.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM3_127_b2_sep16_scaffold_9519_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(7455..7658)
DNA (204bp) protein (68aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_9519_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8168..9073)
DNA (906bp) protein (302aa)
Uncharacterized protein bin=GWA2_Deltaproteo_65_63 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3_127_b2_sep16_scaffold_9519_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

9181..9858
DNA (678bp) protein (226aa)
ABC transporter bin=CNBR_ACIDO species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_127_b2_sep16_scaffold_9519_11

Not on your lists

comp(9909..11132)
DNA (1224bp) protein (408aa)
Major facilitator superfamily MFS_1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3CXK0_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48949.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_9519_12
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(11233..11667)
DNA (435bp) protein (145aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|RuleBase:RU003565, ECO:0000256|SAAS:SAAS00055636}; EC=2.7.7.27 {ECO:0000256|RuleBase:RU003565, ECO:0000256|SAAS:SAAS00055636};; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase Tax=uncultured Acidobacteria bacterium RepID=H5SDC0_9BACT
Displaying 12 items

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