ggKbase home page

PLM3_127_b2_sep16_scaffold_30027

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_30027_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..422)
DNA (420bp) protein (140aa)
Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
two component, sigma54 specific, transcriptional regulator, Fis family
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_127_b2_sep16_scaffold_30027_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(430..2625)
DNA (2196bp) protein (732aa)
PAS/PAC sensor signal transduction histidine kinase; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sensor histidine kinase, HAMP and PAS domain-containing
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_127_b2_sep16_scaffold_30027_3
unknown

Not on your lists

comp(2692..2898)
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_30027_4
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2895..3593)
DNA (699bp) protein (233aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
Sensor protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQ23_STIAD
sensor protein
PLM3_127_b2_sep16_scaffold_30027_5
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3580..4263)
DNA (684bp) protein (228aa)
RedB Tax=Myxococcus xanthus RepID=Q5U9F7_MYXXA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF88136.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
Displaying 5 items

View Taxonomy