ggKbase home page

PLM3_127_b2_sep16_scaffold_10855

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_10855_1
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..699)
DNA (699bp) protein (233aa)
Exporter, putative Tax=Geobacter sulfurreducens RepID=D7AEZ4_GEOSK
exporter
Exporter, putative {ECO:0000313|EMBL:AAR33788.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
PLM3_127_b2_sep16_scaffold_10855_2
unknown

Not on your lists

comp(696..1481)
DNA (786bp) protein (262aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10855_3
unknown

Not on your lists

comp(1484..1729)
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10855_4
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1695..2888)
DNA (1194bp) protein (398aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALE30 RepID=UPI00036FAFAF
hypothetical protein
Tax=BJP_IG2158_Methylococcales_50_91
PLM3_127_b2_sep16_scaffold_10855_5
unknown

Not on your lists

comp(2903..3073)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10855_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3231..4619)
DNA (1389bp) protein (463aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_127_b2_sep16_scaffold_10855_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4901..7060
DNA (2160bp) protein (720aa)
von Willebrand factor type A Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAP2_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:ETW99216.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
von Willebrand factor type A
PLM3_127_b2_sep16_scaffold_10855_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7090..7923)
DNA (834bp) protein (278aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003829F70
Uncharacterized protein {ECO:0000313|EMBL:ETX08324.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
alpha/beta hydrolase fold domain-containing protein
PLM3_127_b2_sep16_scaffold_10855_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8081..8395
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8PG86_9BRAD
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:ETW99214.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
kduD; 2-deoxy-D-gluconate 3-dehydrogenase
PLM3_127_b2_sep16_scaffold_10855_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8382..8690
DNA (309bp) protein (103aa)
2-deoxy-D-gluconate 3-dehydrogenase (EC:1.1.1.125); K00065 2-deoxy-D-gluconate 3-dehydrogenase [EC:1.1.1.125] bin=bin7_NC10_sister species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:ETW98140.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
short-chain dehydrogenase/reductase SDR
PLM3_127_b2_sep16_scaffold_10855_11
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8725..9324
DNA (600bp) protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW99211.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Metallophosphoesterase, putative bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
metallophosphoesterase
PLM3_127_b2_sep16_scaffold_10855_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9610..9987
DNA (378bp) protein (126aa)
Transcriptional regulator, MucR family Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LIG1_SYNFM
Uncharacterized protein {ECO:0000313|EMBL:ETW96739.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
MucR family transcriptional regulator
PLM3_127_b2_sep16_scaffold_10855_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10073..10663)
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WRN5_KYRT2
Uncharacterized protein {ECO:0000313|EMBL:ETW93329.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
TetR family transcriptional regulator
PLM3_127_b2_sep16_scaffold_10855_14
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10724..11542)
DNA (819bp) protein (273aa)
Enoyl-CoA hydratase/isomerase Tax=Sphingobium chlorophenolicum L-1 RepID=F6F2L8_SPHCR
Uncharacterized protein {ECO:0000313|EMBL:ETW93328.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
enoyl-CoA hydratase/isomerase
PLM3_127_b2_sep16_scaffold_10855_15
unknown

Not on your lists

comp(11702..12097)
DNA (396bp) protein (132aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10855_16
unknown

Not on your lists

comp(12072..12302)
DNA (231bp) protein (77aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10855_17
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12488..12799
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U4X1_MYXSD
Tetratricopeptide repeat protein {ECO:0000313|EMBL:KFE65350.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_10855_18
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12828..13352
DNA (525bp) protein (175aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035CC1F8
Uncharacterized protein {ECO:0000313|EMBL:ETX06907.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
SMP-30/Gluconolaconase/LRE-like region-containing protein
PLM3_127_b2_sep16_scaffold_10855_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13511..14506
DNA (996bp) protein (332aa)
GTPase or GTP-binding protein-like protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZ19_NITHN
Uncharacterized protein {ECO:0000313|EMBL:ETW94924.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
GTPase or GTP-binding protein-like protein
PLM3_127_b2_sep16_scaffold_10855_20
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14524..14625
DNA (102bp) protein (34aa)
Short-chain dehydrogenase/reductase SDR Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V674_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:ETW99868.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
short-chain dehydrogenase/reductase SDR
Displaying 20 items

View Taxonomy