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PLM3_127_b2_sep16_scaffold_3894

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3894_1
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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3..653
DNA (651bp) protein (217aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW96785.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
peptidase S16 lon domain-containing protein bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
ATP-dependent protease
PLM3_127_b2_sep16_scaffold_3894_2
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(596..850)
DNA (255bp) protein (85aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YMH2_9DELT
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:CBX31766.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
PLM3_127_b2_sep16_scaffold_3894_3
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1123..1977)
DNA (855bp) protein (285aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB25794.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
hypothetical protein
Putative uncharacterized protein bin=GWE1_T_denit_62_9 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
PLM3_127_b2_sep16_scaffold_3894_4
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

comp(1994..2485)
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Haloferax prahovense DSM 18310 RepID=M0GKR4_9EURY
hypothetical protein
Tax=RBG_13_Aminicenantes_63_10_curated
PLM3_127_b2_sep16_scaffold_3894_5
unknown

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comp(2431..2583)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3894_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(2602..3414)
DNA (813bp) protein (271aa)
formate transporter Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000360A864
focA; formate transporter 1 (Formate channel 1)
Putative formate transporter 1 (Formate channel 1) {ECO:0000313|EMBL:CBE69334.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3_127_b2_sep16_scaffold_3894_7
unknown

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comp(3711..4124)
DNA (414bp) protein (138aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3894_8
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(4304..5290)
DNA (987bp) protein (329aa)
MgtE integral membrane region Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGG9_AMICL
MgtE integral membrane protein
MgtE integral membrane region {ECO:0000313|EMBL:ADE57651.1}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
PLM3_127_b2_sep16_scaffold_3894_9
unknown

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comp(5393..5506)
DNA (114bp) protein (38aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3894_10
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(5503..7056)
DNA (1554bp) protein (518aa)
sodium:calcium symporter Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B6AF17
SNF family Na+-dependent transporter
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
PLM3_127_b2_sep16_scaffold_3894_11
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

7663..8601
DNA (939bp) protein (313aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase Tax=Azospirillum brasilense Sp245 RepID=G8AGS5_AZOBR
Tax=RBG_16_Chloroflexi_52_11_curated
PLM3_127_b2_sep16_scaffold_3894_12
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8598..9734)
DNA (1137bp) protein (379aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase {ECO:0000313|EMBL:AEG14974.1}; EC=2.7.1.11 {ECO:0000313|EMBL:AEG14974.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
6-phosphofructokinase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CPW5_DESK7
PLM3_127_b2_sep16_scaffold_3894_13
GWA2_OD1_44_12, Parcubacteria, Bacteria

Not on your lists

comp(9824..10852)
DNA (1029bp) protein (343aa)
ald; alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase Tax=Photobacterium sp. AK15 RepID=L8JF69_9GAMM
Alanine dehydrogenase {ECO:0000313|EMBL:KKT34939.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_12.;"
PLM3_127_b2_sep16_scaffold_3894_14
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11288..11491
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZB23_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM91063.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
PLM3_127_b2_sep16_scaffold_3894_15
RLO_PLX_64_10, Bacteria

Not on your lists

11498..11758
DNA (261bp) protein (87aa)
Putative uncharacterized protein Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YBN9_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_3894_16
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12010..12465
DNA (456bp) protein (152aa)
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Universal stress protein bin=GWC2_Nitrospirae_57_13 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
uspa domain-containing protein
PLM3_127_b2_sep16_scaffold_3894_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12542..13891
DNA (1350bp) protein (450aa)
GTPase {ECO:0000313|EMBL:ETW98253.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein bin=bin8_Chloro species=Pyrococcus sp. ST04 genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=bin8_Chloro organism_group=Chloroflexi
putative GTPase
PLM3_127_b2_sep16_scaffold_3894_18
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14130..15293
DNA (1164bp) protein (388aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW97492.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_3894_19
unknown

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15331..15501
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3894_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15640..17958
DNA (2319bp) protein (773aa)
Copper-exporting ATPase Tax=Sorangium cellulosum So0157-2 RepID=S4XJL3_SORCE
copper-exporting ATPase
Copper-exporting ATPase {ECO:0000313|EMBL:AGP32734.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM3_127_b2_sep16_scaffold_3894_21
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

Not on your lists

18370..18618
DNA (249bp) protein (83aa)
hypothetical protein bin=bin3_NC10 species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RBG_16_Chloroflexi_58_14_curated
PLM3_127_b2_sep16_scaffold_3894_22
CSP1_5_NC10, NC10, Bacteria

Not on your lists

18618..19271
DNA (654bp) protein (218aa)
Isoprenylcysteine carboxyl methyltransferase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
putative protein-S-isoprenylcysteine methyltransferase
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_3894_23
R_NC10_66_22, NC10, Bacteria

Not on your lists

19415..19819
DNA (405bp) protein (135aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_3894_24
unknown

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19865..20302
DNA (438bp) protein (146aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3894_25
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20368..21624
DNA (1257bp) protein (419aa)
hypothetical protein Tax=Methylosarcina fibrata RepID=UPI000375F0D2
Heavy metal RND efflux outer membrane protein, CzcC family
Tax=BJP_IG2158_Methylococcales_50_91
PLM3_127_b2_sep16_scaffold_3894_26
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21621..22877
DNA (1257bp) protein (419aa)
hypothetical protein Tax=Methylococcus capsulatus RepID=UPI00030423C4
putative Co/Zn/Cd efflux system membrane fusion protein
Tax=BJP_IG2158_Methylococcales_50_91
PLM3_127_b2_sep16_scaffold_3894_27
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22983..23699
DNA (717bp) protein (239aa)
cation transporter Tax=Methylococcus capsulatus RepID=UPI000308D191
Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
Displaying 27 items

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