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PLM3_127_b2_sep16_scaffold_4350

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4350_1
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(268..1074)
DNA (807bp) protein (269aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW99848.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_4350_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1078..1653)
DNA (576bp) protein (192aa)
RNA polymerase sigma factor Tax=Cystobacter fuscus DSM 2262 RepID=S9PC03_9DELT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
RNA polymerase sigma factor RpoE
PLM3_127_b2_sep16_scaffold_4350_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1665..3761)
DNA (2097bp) protein (699aa)
PBS lyase HEAT domain protein repeat-containing protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UU23_ROSS1
Uncharacterized protein {ECO:0000313|EMBL:ETX04599.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
HEAT repeat-containing PBS lyase
PLM3_127_b2_sep16_scaffold_4350_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3842..4291)
DNA (450bp) protein (150aa)
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
NusB antitermination factor; K03625 N utilization substance protein B bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
nusB; transcription antitermination factor NusB
PLM3_127_b2_sep16_scaffold_4350_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4304..4777)
DNA (474bp) protein (158aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase Tax=Geobacter sp. (strain M21) RepID=RISB_GEOSM
PLM3_127_b2_sep16_scaffold_4350_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4829..6070)
DNA (1242bp) protein (414aa)
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase
Riboflavin biosynthesis protein RibA bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
PLM3_127_b2_sep16_scaffold_4350_7
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(6123..7235)
DNA (1113bp) protein (371aa)
5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RK07_MOOTA
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
PLM3_127_b2_sep16_scaffold_4350_8
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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comp(7245..9152)
DNA (1908bp) protein (636aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase bin=GWC2_Geobacteraceae_55_20 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
Displaying 8 items

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