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PLM3_127_b2_sep16_scaffold_17058

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_17058_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1..171
DNA (171bp) protein (57aa)
hypothetical protein; K07083 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
solute-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_17058_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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477..677
DNA (201bp) protein (67aa)
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family) bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
cold-shock DNA-binding domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_17058_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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793..2526
DNA (1734bp) protein (578aa)
id=5225646 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_17058_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2558..2995)
DNA (438bp) protein (146aa)
ACT domain-containing protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ACT domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_17058_5
CG_Arma_01, Armatimonadetes, Bacteria

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comp(3193..4200)
DNA (1008bp) protein (336aa)
Sodium symporter, ABC superfamily protein Tax=Rhodococcus sp. (strain RHA1) RepID=Q0SCC2_RHOSR
sodium symporter ABC transporter
Tax=CG_Arma_01
Displaying 5 items

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