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PLM3_127_b2_sep16_scaffold_15582

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_15582_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2..982
DNA (981bp) protein (327aa)
endonuclease IV (EC:3.1.21.2)
Xylose isomerase domain protein TIM barrel Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKQ5_METZD bin=16ft_combo_ws3_JS1 species=Methanosalsum zhilinae genus=Methanosalsum taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_15582_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

1032..1676
DNA (645bp) protein (215aa)
Beta-lactamase domain protein Tax=Magnetococcus sp. (strain MC-1) RepID=A0LDZ9_MAGSM bin=16ft_combo_ws3_JS1 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
beta-lactamase domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_15582_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1673..2725
DNA (1053bp) protein (351aa)
Phenylacetic acid degradation protein PaaY Tax=Streptomyces sp. C RepID=D9VKR1_9ACTO bin=16ft_combo_ws3_JS1 species=Streptomyces sp. C genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
carbonic anhydrase/acetyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_15582_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2722..3288
DNA (567bp) protein (189aa)
Molybdenum cofactor synthesis domain protein Tax=Pleurocapsa sp. PCC 7327 RepID=K9T1M0_9CYAN bin=16ft_combo_ws3_JS1 species=Pleurocapsa minor genus=Pleurocapsa taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
molybdenum cofactor biosynthesis protein B
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_15582_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

3291..3845
DNA (555bp) protein (185aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase Tax=uncultured Chloroflexi bacterium RepID=H5SLA3_9CHLR bin=16ft_combo_ws3_JS1 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_15582_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

3923..4369
DNA (447bp) protein (149aa)
NADH-quinone oxidoreductase subunit I; K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
NADH-quinone oxidoreductase subunit I
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_15582_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

4703..5068
DNA (366bp) protein (122aa)
Heat shock protein Hsp20 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML01_9BACT bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
heat shock protein Hsp20
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 7 items

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