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PLM3_127_b2_sep16_scaffold_6789

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6789_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(6..1004)
DNA (999bp) protein (333aa)
NAD-dependent epimerase/dehydratase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKI6_KORVE bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
NAD-dependent epimerase/dehydratase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6789_2
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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1320..1916
DNA (597bp) protein (199aa)
BioY protein; K03523 putative biotin biosynthesis protein BioY bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
BioY protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3_127_b2_sep16_scaffold_6789_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2160..2750
DNA (591bp) protein (197aa)
3-hydroxyacyl-CoA dehydrogenase Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KA54_9FIRM
3-hydroxyacyl-CoA dehydrogenase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6789_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

2747..3556
DNA (810bp) protein (270aa)
hypothetical protein Tax=Streptomyces sp. LaPpAH-202 RepID=UPI00036E65DC
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6789_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3627..5090
DNA (1464bp) protein (488aa)
aldehyde dehydrogenase (NAD) family protein (EC:1.2.1.-)
Aldehyde Dehydrogenase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MJ64_9BACT
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6789_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

5099..6223
DNA (1125bp) protein (375aa)
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6789_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

6235..7419
DNA (1185bp) protein (395aa)
Acetyl-CoA acetyltransferase bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
atoB; acetyl-CoA acetyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6789_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(7490..8377)
DNA (888bp) protein (296aa)
formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.23 4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
DNA-formamidopyrimidine glycosylase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6789_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(8485..9234)
DNA (750bp) protein (250aa)
ABC-3 protein; K02075 zinc/manganese transport system permease protein bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
ABC-3 protein
Tax=CSP1_6_Rokubacteria
Displaying 9 items

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