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PLM3_127_b2_sep16_scaffold_4394

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4394_1
RLO_RIF05_58_11, RIF5, Bacteria

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comp(3..1145)
DNA (1143bp) protein (381aa)
Periplasmic sensor hybrid histidine kinase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUC5_KORVE
periplasmic sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM3_127_b2_sep16_scaffold_4394_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(1148..1849)
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B3G3_TURPD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_127_b2_sep16_scaffold_4394_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2031..3989)
DNA (1959bp) protein (653aa)
peptidase S9, prolyl oligopeptidase active site region Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3B04 bin=16ft_combo_ws3_JS1 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
tolB; peptidase S9 prolyl oligopeptidase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_4394_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(4055..5014)
DNA (960bp) protein (320aa)
ABC transporter permease; K09686 antibiotic transport system permease protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC transporter permease
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_4394_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(5011..5853)
DNA (843bp) protein (281aa)
ABC-2 type transporter Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B2R5_HERA2 bin=16ft_combo_ws3_JS1 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_4394_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(5862..6920)
DNA (1059bp) protein (353aa)
ABC transporter related protein Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3CD7 bin=16ft_combo_ws3_JS1 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative ABC transporter ATP-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_4394_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

7097..9094
DNA (1998bp) protein (666aa)
Aminopeptidase, putative Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CP15_SHEPW bin=16ft_combo_ws3_JS1 species=Shewanella piezotolerans genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
aminopeptidase
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 7 items

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