name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM3_127_b2_sep16_scaffold_4565_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
|
Not on your lists |
1..543
|
alias=16ft_combo_ws3_scaffold_427_9 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
|
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PLM3_127_b2_sep16_scaffold_4565_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
|
Not on your lists |
786..1037
|
Competence protein ComEA Tax=uncultured candidate division OP1 bacterium RepID=H5SC70_9BACT bin=16ft_combo_ws3_JS1 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
helix-hairpin-helix repeat-containing competence protein ComEA
Tax=RBG_16_RIF_WS3X_71_46_curated
|
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PLM3_127_b2_sep16_scaffold_4565_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
|
Not on your lists |
1307..3001
|
type II secretion system protein E; K02652 type IV pilus assembly protein PilB bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
pilB; type IV pilus biogenesis ATPase PilB
Tax=RBG_16_RIF_WS3X_71_46_curated
|
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PLM3_127_b2_sep16_scaffold_4565_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
|
Not on your lists |
3047..4123
|
Twitching mobility protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA13_GEMAT bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
pilT; twitching mobility protein
Tax=RBG_16_RIF_WS3X_71_46_curated
|
|
PLM3_127_b2_sep16_scaffold_4565_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
|
Not on your lists |
4134..5345
|
type II secretion system protein; K02653 type IV pilus assembly protein PilC bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
type II secretion system protein
Tax=RBG_16_RIF_WS3X_71_46_curated
|
|
PLM3_127_b2_sep16_scaffold_4565_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
|
Not on your lists |
5345..7015
|
signal transduction histidine kinase NtrB; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative sensor protein PilS (EC:2.7.13.3)
Tax=RBG_16_RIF_WS3X_71_46_curated
|
|
PLM3_127_b2_sep16_scaffold_4565_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
|
Not on your lists |
7051..8457
|
two component, sigma54 specific, Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
sigma-54 factor interaction domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
|
|
PLM3_127_b2_sep16_scaffold_4565_8
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria
|
Not on your lists |
8718..8885
|
prokaryotic N-terminal methylation motif domain protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
pilA; type IV pilin PilA
Tax=RIFOXYC12_FULL_TA06_54_24_curated
|