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PLM3_127_b2_sep16_scaffold_12346

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_12346_1
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..922)
DNA (921bp) protein (307aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:GAM11409.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
PLM3_127_b2_sep16_scaffold_12346_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1012..2094)
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LIU7_THEPS bin=16ft_combo_ws3_JS1 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptide chain release factor 1
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_12346_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2106..3083)
DNA (978bp) protein (326aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_12346_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3159..3431)
DNA (273bp) protein (91aa)
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
rpmE; 50S ribosomal protein L31
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_12346_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3620..4183)
DNA (564bp) protein (188aa)
methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA Tax=planctomycete KSU-1 RepID=I3IIY6_9PLAN bin=16ft_combo_ws3_JS1 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_12346_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(4281..4760)
DNA (480bp) protein (160aa)
hypothetical protein Tax=Methylotenera sp. 1P/1 RepID=UPI00036D099A
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_12346_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4776..5060)
DNA (285bp) protein (95aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87950.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 7 items

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