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PLM3_127_b2_sep16_scaffold_46456

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_46456_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1..1392)
DNA (1392bp) protein (464aa)
chaperonin GroEL Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174586A bin=16ft_combo_ws3_JS1 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
groEL; chaperonin GroEL
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_46456_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2027..4150)
DNA (2124bp) protein (708aa)
WD40 domain protein beta Propeller Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEA1_ANADF bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
periplasmic component of the Tol biopolymer transport system
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_46456_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(4188..4817)
DNA (630bp) protein (210aa)
Peptidase M28 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028V5_SOLUE bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptidase M28
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_46456_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(4775..6076)
DNA (1302bp) protein (434aa)
Peptidase M28 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028V5_SOLUE bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptidase M28
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_46456_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(6079..6246)
DNA (168bp) protein (56aa)
Type III pantothenate kinase Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I1G9_DESAP bin=16ft_combo_ws3_JS1 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Baf family transcriptional activator
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 5 items

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