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PLM3_127_b2_sep16_scaffold_109781

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_109781_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1..177)
DNA (177bp) protein (59aa)
NHL repeat family protein Tax=Rhodococcus sp. JVH1 RepID=J1R1V5_9NOCA bin=16ft_combo_ws3_JS1 species=Rhodococcus sp. JVH1 genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_109781_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(153..572)
DNA (420bp) protein (140aa)
id=5225831 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_109781_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(596..853)
DNA (258bp) protein (86aa)
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Slackia taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
30S ribosomal protein S20
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_109781_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

1463..2836
DNA (1374bp) protein (458aa)
UvrABC system protein C Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CYL4_PELTS bin=16ft_combo_ws3_JS1 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
uvrC; excinuclease ABC subunit C
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_109781_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

2833..3744
DNA (912bp) protein (304aa)
Tyrosine recombinase XerD Tax=Bacillus tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WXY8_BACT2 bin=16ft_combo_ws3_JS1 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
tyrosine recombinase XerD
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 5 items

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