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PLM3_127_b2_sep16_scaffold_13131

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_13131_1
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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238..1872
DNA (1635bp) protein (545aa)
GTPase HflX Tax=Candidatus Nitrospira defluvii RepID=D8PFY2_9BACT
putative GTPase HflX, GTP-binding protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_13131_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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1913..2569
DNA (657bp) protein (219aa)
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Endonuclease III Tax=Candidatus Nitrospira defluvii RepID=D8PFY3_9BACT
PLM3_127_b2_sep16_scaffold_13131_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

2566..3444
DNA (879bp) protein (293aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PFY4_9BACT
yicC; hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_13131_4
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

3441..4151
DNA (711bp) protein (237aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase Tax=Candidatus Nitrospira defluvii RepID=D8PFY5_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_13131_5
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

4171..4527
DNA (357bp) protein (119aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega Tax=Candidatus Nitrospira defluvii RepID=D8PFY6_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_13131_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4531..5346
DNA (816bp) protein (272aa)
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5)
Coenzyme A biosynthesis bifunctional protein CoaBC {ECO:0000313|EMBL:CBK42174.1}; EC=4.1.1.36 {ECO:0000313|EMBL:CBK42174.1};; EC=6.3.2.5 {ECO:0000313|EMBL:CBK42174.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Coenzyme A biosynthesis bifunctional protein CoaBC Tax=Candidatus Nitrospira defluvii RepID=D8PFY7_9BACT
PLM3_127_b2_sep16_scaffold_13131_7
unknown

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comp(5233..5505)
DNA (273bp) protein (91aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_13131_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

5784..6131
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PFY8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42175.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_127_b2_sep16_scaffold_13131_9
unknown

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6334..6540
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_13131_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

6634..7131
DNA (498bp) protein (166aa)
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
3-dehydroquinate dehydratase Tax=Candidatus Nitrospira defluvii RepID=D8PFY9_9BACT
PLM3_127_b2_sep16_scaffold_13131_11
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

7179..7739
DNA (561bp) protein (187aa)
Elongation factor P Tax=Candidatus Nitrospira defluvii RepID=D8PFZ0_9BACT
efp; elongation factor P
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_13131_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

7736..8308
DNA (573bp) protein (191aa)
Acetyl CoA carboxylase, biotin carboxyl carrier protein Tax=Candidatus Nitrospira defluvii RepID=D8PFZ1_9BACT
accB; acetyl Coa carboxylase, biotin carboxyl carrier protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_13131_13
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

8342..9682
DNA (1341bp) protein (447aa)
accC; acetyl-Coa carboxylase, biotin carboxylase (EC:6.4.1.2 6.3.4.14)
Acetyl-CoA carboxylase, biotin carboxylase Tax=Candidatus Nitrospira defluvii RepID=D8PFZ2_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_13131_14
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9767..10009
DNA (243bp) protein (81aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Leptospira weilii genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
SpoVT/AbrB domain-containing protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3_127_b2_sep16_scaffold_13131_15
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10006..10404
DNA (399bp) protein (133aa)
PilT domain-containing protein bin=GWD2_Deltaproteobacteria_55_8 species=Leptolyngbya sp. PCC 7375 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PilT domain-containing protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
Displaying 15 items

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