ggKbase home page

PLM3_127_b2_sep16_scaffold_33108

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_33108_1
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

2..772
DNA (771bp) protein (257aa)
putative n-acetylmuramoyl-L-alanine amidase AmiB (EC:3.5.1.28)
Putative N-acetylmuramoyl-L-alanine amidase AmiB Tax=Candidatus Nitrospira defluvii RepID=D8PHD1_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_33108_2
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

801..1538
DNA (738bp) protein (246aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A Tax=Candidatus Nitrospira defluvii RepID=D8PHD2_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_33108_3
unknown

Not on your lists

1552..1887
DNA (336bp) protein (112aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_33108_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1759..2412)
DNA (654bp) protein (218aa)
cysE; serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441, ECO:0000313|EMBL:CBK42671.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Serine acetyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PHD4_9BACT
PLM3_127_b2_sep16_scaffold_33108_5
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(2425..2754)
DNA (330bp) protein (110aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Tax=Candidatus Nitrospira defluvii RepID=D8PHD5_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_33108_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(2994..3743)
DNA (750bp) protein (250aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PHD6_9BACT
PLM3_127_b2_sep16_scaffold_33108_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(3918..5441)
DNA (1524bp) protein (508aa)
degQ; protease DegQ (EC:3.4.21.-)
Protease DegQ {ECO:0000313|EMBL:CBK42675.1}; EC=3.4.21.- {ECO:0000313|EMBL:CBK42675.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Protease DegQ Tax=Candidatus Nitrospira defluvii RepID=D8PHD8_9BACT
Displaying 7 items

View Taxonomy