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PLM3_127_b2_sep16_scaffold_16088

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_16088_1
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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1..186
DNA (186bp) protein (62aa)
RNA methyltransferase, TrmH family, group 3 (EC:2.1.1.-)
RNA methyltransferase Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B43377
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_16088_2
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

183..347
DNA (165bp) protein (55aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P7K4_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_16088_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(344..619)
DNA (276bp) protein (92aa)
Transcriptional regulator, LuxR family Tax=Candidatus Nitrospira defluvii RepID=D8P8E0_9BACT
LuxR family transcriptional regulator (fragment)
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_16088_4
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

848..1615
DNA (768bp) protein (256aa)
pilD; type IV pilus prepilin peptidase PilD (EC:2.1.1.- 3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme Tax=Candidatus Nitrospira defluvii RepID=D8P8D9_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_16088_5
unknown

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1879..2034
DNA (156bp) protein (52aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_16088_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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1989..2336
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8D8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43770.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_127_b2_sep16_scaffold_16088_7
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

2333..2824
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8D7_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_16088_8
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

2850..3590
DNA (741bp) protein (247aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8D6_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_16088_9
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

3624..5111
DNA (1488bp) protein (496aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8D5_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_16088_10
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

5135..6250
DNA (1116bp) protein (372aa)
General secretion pathway protein E, contains GAF domain Tax=Candidatus Nitrospira defluvii RepID=B3U4T7_9BACT
gspE2; general secretion pathway protein E
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
Displaying 10 items

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