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PLM3_127_b2_sep16_scaffold_8452

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_8452_1
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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3..272
DNA (270bp) protein (90aa)
50S ribosomal protein L6 Tax=Candidatus Nitrospira defluvii RepID=D8PCW7_9BACT
rplF; 50S ribosomal protein L6
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_8452_2
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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281..646
DNA (366bp) protein (122aa)
50S ribosomal protein L18 Tax=Candidatus Nitrospira defluvii RepID=D8PCW8_9BACT
rplR; 50S ribosomal protein L18
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_8452_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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682..1191
DNA (510bp) protein (170aa)
30S ribosomal protein S5 Tax=Candidatus Nitrospira defluvii RepID=D8PCW9_9BACT
rpsE; 30S ribosomal protein S5
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_8452_4
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists


1184..1852
DNA (669bp) protein (223aa)
50S ribosomal protein L15 Tax=Candidatus Nitrospira defluvii RepID=D8PCX1_9BACT
rplO; 50S ribosomal protein L15
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_8452_5
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists


1845..3164
DNA (1320bp) protein (440aa)
Protein translocase subunit SecY Tax=Candidatus Nitrospira defluvii RepID=D8PCX2_9BACT
secY; preprotein translocase, membrane subunit SecY
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_8452_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

3174..3830
DNA (657bp) protein (219aa)
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Adenylate kinase Tax=Candidatus Nitrospira defluvii RepID=D8PCX3_9BACT
PLM3_127_b2_sep16_scaffold_8452_7
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

3827..4618
DNA (792bp) protein (264aa)
map; methionyl aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase Tax=Candidatus Nitrospira defluvii RepID=D8PCX4_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_8452_8
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

4625..4843
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 Tax=Leptospirillum sp. Group II RepID=A3EVP8_9BACT
infA; translation initiation factor IF-1
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_8452_9
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists


5108..5494
DNA (387bp) protein (129aa)
30S ribosomal protein S13 Tax=Candidatus Nitrospira defluvii RepID=D8PCX7_9BACT
rpsM; 30S ribosomal protein S13
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_8452_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


5525..5908
DNA (384bp) protein (128aa)
30S ribosomal protein S11 Tax=Candidatus Nitrospira defluvii RepID=D8PCX8_9BACT
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310, ECO:0000313|EMBL:CBK41087.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_127_b2_sep16_scaffold_8452_11
unknown

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6237..6443
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8452_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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6415..6834
DNA (420bp) protein (140aa)
30S ribosomal protein S4 Tax=Candidatus Nitrospira defluvii RepID=D8PCX9_9BACT
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000313|EMBL:CBK41088.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_127_b2_sep16_scaffold_8452_13
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

6919..7920
DNA (1002bp) protein (334aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha Tax=Candidatus Nitrospira defluvii RepID=D8PCY0_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
Displaying 13 items

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