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PLM3_127_b2_sep16_scaffold_32425

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_32425_1
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..547)
DNA (546bp) protein (182aa)
Elongation factor Tu Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SLE6_THEM7
translation elongation factor 1A (EF-1A/EF-Tu)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
PLM3_127_b2_sep16_scaffold_32425_trna_4
unknown

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comp(605..677)
DNA (73bp)
transferRNA Thr
PLM3_127_b2_sep16_scaffold_32425_trna_3
unknown

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comp(795..867)
DNA (73bp)
transferRNA Gly
PLM3_127_b2_sep16_scaffold_32425_trna_2
unknown

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comp(964..1047)
DNA (84bp)
transferRNA Tyr
PLM3_127_b2_sep16_scaffold_32425_trna_1
unknown

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comp(1335..1407)
DNA (73bp)
transferRNA Thr
PLM3_127_b2_sep16_scaffold_32425_2
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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1640..2689
DNA (1050bp) protein (350aa)
Sulfotransferase domain protein Tax=Moorea producens 3L RepID=F4XMP7_9CYAN
Sulfotransferase domain protein {ECO:0000313|EMBL:EGJ33956.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
sulfotransferase
PLM3_127_b2_sep16_scaffold_32425_3
unknown

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comp(2893..3225)
DNA (333bp) protein (111aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_32425_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3174..4274)
DNA (1101bp) protein (367aa)
Cysteine--tRNA ligase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L7_GEMAT
Cysteinyl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_32425_5
RBG_16_RIF05_58_8_curated, RIF5, Bacteria

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comp(4271..5206)
DNA (936bp) protein (312aa)
UPI00039E5AB3 related cluster Tax=unknown RepID=UPI00039E5AB3
mechanosensitive ion channel MscS
Tax=RBG_16_RIF05_58_8_curated
PLM3_127_b2_sep16_scaffold_32425_6
unknown

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comp(5582..5701)
DNA (120bp) protein (40aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_32425_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5734..7110)
DNA (1377bp) protein (459aa)
Uncharacterized protein Tax=Burkholderia RepID=A4JNN9_BURVG bin=16ft_combo_ws3_JS1 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
protein of unknown function DUF1611
Uncharacterized protein {ECO:0000313|EMBL:AHG90293.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_32425_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(7115..8245)
DNA (1131bp) protein (377aa)
hypothetical protein Tax=cyanobacterium PCC 7702 RepID=UPI0003744E93
protein of unknown function UPF0118
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_32425_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(8242..8793)
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L5_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_32425_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(8790..9020)
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L5_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_32425_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(9027..9452)
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L4_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_32425_12
unknown

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comp(9449..9583)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_32425_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9580..9942)
DNA (363bp) protein (121aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_32425_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9939..10238)
DNA (300bp) protein (100aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_32425_15
unknown

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comp(10324..10509)
DNA (186bp) protein (62aa)

This feature has no annotations

Displaying 19 items

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