ggKbase home page

PLM3_127_b2_sep16_scaffold_27420

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_27420_1
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

104..538
DNA (435bp) protein (145aa)
Transposase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF18_9BACT
transposase
Tax=RBG_16_Zixibacteria_53_22_curated
PLM3_127_b2_sep16_scaffold_27420_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1093..1917)
DNA (825bp) protein (275aa)
Peptidase M55 D-aminopeptidase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEB7_THET1
peptidase M55 D-aminopeptidase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM3_127_b2_sep16_scaffold_27420_3
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1967..2383
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDB3_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ50739.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
PLM3_127_b2_sep16_scaffold_27420_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2760..3458)
DNA (699bp) protein (233aa)
Phenazine biosynthesis protein PhzF family bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phenazine biosynthesis protein PhzF family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_27420_5

Not on your lists

comp(3455..3658)
DNA (204bp) protein (68aa)
Endoribonuclease L-PSP (Fragment) Tax=mine drainage metagenome RepID=T0ZC75_9ZZZZ
Endoribonuclease L-PSP {ECO:0000313|EMBL:EQD45581.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
endoribonuclease L-PSP
PLM3_127_b2_sep16_scaffold_27420_6
unknown

Not on your lists

comp(3673..3852)
DNA (180bp) protein (60aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_27420_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4156..5259
DNA (1104bp) protein (368aa)
Two-component response regulator Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T1_GEMAT
response regulator receiver
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_27420_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5604..6383
DNA (780bp) protein (260aa)
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A543_GEMAT
RNA polymerase sigma factor, FliA/WhiG family
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 8 items

View Taxonomy