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PLM3_127_b2_sep16_scaffold_8405

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_8405_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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57..2993
DNA (2937bp) protein (979aa)
DNA polymerase III, epsilon subunit Tax=Caldithrix abyssi DSM 13497 RepID=H1XUL9_9BACT
DNA polymerase III subunit epsilon family exonuclease
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM3_127_b2_sep16_scaffold_8405_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3073..3630
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9Z0_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87932.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_8405_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3627..4433
DNA (807bp) protein (269aa)
Oxidoreductase, SDR family Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBM9_SINAD
Carveol dehydrogenase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_8405_4
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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4529..4945
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4ECB0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF82322.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_8405_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5022..5222
DNA (201bp) protein (67aa)
30S ribosomal protein S21 2 Tax=Gloeobacter RepID=RS212_GLOVI
30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_8405_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5669..6043
DNA (375bp) protein (125aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_8405_7
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6040..6555)
DNA (516bp) protein (172aa)
Uncharacterized protein bin=GWE2_Firmicute_51_13 species=Clostridium sporogenes genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein
Tax=BJP_S1_SUB10_Methylophilales_55_32
PLM3_127_b2_sep16_scaffold_8405_8
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(6712..8508)
DNA (1797bp) protein (599aa)
Dynamin family protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B3N4_HERA2
dynamin family protein
Dynamin family protein {ECO:0000313|EMBL:ABX05606.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM3_127_b2_sep16_scaffold_8405_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8785..8997
DNA (213bp) protein (71aa)
Cold shock protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Q1_GEMAT
Cold-shock protein DNA-binding protein
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:AHG89448.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_8405_10

Not on your lists

9465..10607
DNA (1143bp) protein (381aa)
Uncharacterized protein {ECO:0000313|EMBL:AHN97867.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium lac127.;"
PLM3_127_b2_sep16_scaffold_8405_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10685..11857
DNA (1173bp) protein (391aa)
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT
RNA polymerase sigma factor
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_8405_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(11959..13128)
DNA (1170bp) protein (390aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanyl-tRNA synthetase {ECO:0000313|EMBL:ABJ82468.1}; EC=6.1.1.7 {ECO:0000313|EMBL:ABJ82468.1};; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Alanyl-tRNA synthetase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028T4_SOLUE
PLM3_127_b2_sep16_scaffold_8405_13
unknown

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comp(13205..13717)
DNA (513bp) protein (171aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8405_14
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(13891..15156)
DNA (1266bp) protein (422aa)
Transcriptional regulator, ArsR family Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GEV2_9FIRM
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
PLM3_127_b2_sep16_scaffold_8405_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(15293..16312)
DNA (1020bp) protein (340aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_8405_16
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

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comp(16299..17126)
DNA (828bp) protein (276aa)
Protein containing D-alanine--D-alanine ligase Tax=Rhodopirellula sallentina SM41 RepID=M5UAG9_9PLAN
D-alanine--D-alanine ligase
Tax=RIFOXYB2_FULL_Elusimicrobia_49_7_curated
Displaying 16 items

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