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PLM3_127_b2_sep16_scaffold_12206

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_12206_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3..2957)
DNA (2955bp) protein (985aa)
Acriflavin resistance protein bin=GWF2_Methylomirabilis_70_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acriflavin resistance protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_12206_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2954..4258)
DNA (1305bp) protein (435aa)
Efflux transporter, RND family, MFP subunit bin=GWA2_Methylomirabilis_73_35 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RND family efflux pump membrane fusion lipoprotein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_12206_3
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4255..4908)
DNA (654bp) protein (218aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00035C8908
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EHB68141.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
tetR family regulatory protein
PLM3_127_b2_sep16_scaffold_12206_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5236..5934
DNA (699bp) protein (233aa)
Response regulator receiver Tax=Alicycliphilus denitrificans RepID=E8TUL9_ALIDB
winged helix family two component transcriptional regulator
Response regulator receiver {ECO:0000313|EMBL:ADU98095.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
PLM3_127_b2_sep16_scaffold_12206_5
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5936..7303
DNA (1368bp) protein (456aa)
histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
Histidine kinase Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JG39_ANAD2
PLM3_127_b2_sep16_scaffold_12206_6
unknown

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7326..7562
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_12206_7
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7559..8059)
DNA (501bp) protein (167aa)
AhpC/TSA-family protein Tax=Bordetella bronchiseptica 253 RepID=K4QKB9_BORBO
AhpC/TSA-family protein
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_12206_8

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comp(8500..9117)
DNA (618bp) protein (206aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63)
Methylated-DNA/protein-cysteinemethyltransferase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTW4_9CHLR
PLM3_127_b2_sep16_scaffold_12206_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(9140..9604)
DNA (465bp) protein (155aa)
Adenylyl cyclase class-3/4/guanylyl cyclase:Tetratricopeptide TPR_4 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus pinatubonensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
adenylate cyclase
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 9 items

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