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PLM3_30_b1_sep16_scaffold_548

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_548_1
Brevibacillus brevis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3..422
DNA (420bp) protein (140aa)
Conserved hypothetical membrane protein Tax=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) RepID=C0Z7C3_BREBN
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:BAH42166.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599).;"
PLM3_30_b1_sep16_scaffold_548_2
unknown

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comp(575..823)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_548_3
unknown

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comp(1023..1118)
DNA (96bp) protein (32aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_548_4
unknown

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comp(1121..1480)
DNA (360bp) protein (120aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_548_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1854..2153)
DNA (300bp) protein (100aa)
Cupin domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHG5_NITGG
cupin domain-containing protein
Cupin domain-containing protein {ECO:0000313|EMBL:AFU58343.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_548_6
unknown

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2615..2881
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_548_7
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3019..3600)
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGC1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82489.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_548_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3669..3986
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK01_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60450.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_548_9
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4376..5158)
DNA (783bp) protein (261aa)
cobM; precorrin-4 C11-methyltransferase (EC:2.1.1.133)
Precorrin-4 C11-methyltransferase {ECO:0000313|EMBL:AIC16127.1}; EC=2.1.1.133 {ECO:0000313|EMBL:AIC16127.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Precorrin-4 C11-methyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILI8_NITGG
PLM3_30_b1_sep16_scaffold_548_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5151..5873)
DNA (723bp) protein (241aa)
cobI; precorrin-2 C(20)-methyltransferase (EC:2.1.1.130 2.1.1.151)
Precorrin-2 C20-methyltransferase {ECO:0000313|EMBL:AFU60447.1}; EC=2.1.1.130 {ECO:0000313|EMBL:AFU60447.1};; EC=2.1.1.151 {ECO:0000313|EMBL:AFU60447.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Precorrin-2 C20-methyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMN9_NITGG
PLM3_30_b1_sep16_scaffold_548_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5986..6576)
DNA (591bp) protein (197aa)
cbiT; precorrin-6Y C5,15-methyltransferase (EC:2.1.1.-)
Probable cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00786}; EC=2.1.1.196 {ECO:0000256|HAMAP-Rule:MF_00786};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Probable cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating] Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL12_NITGG
PLM3_30_b1_sep16_scaffold_548_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6996..8978
DNA (1983bp) protein (661aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFF7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60101.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_548_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9070..9642
DNA (573bp) protein (191aa)
Putative signal-transduction protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL16_NITGG
putative signal-transduction protein
Putative signal-transduction protein {ECO:0000313|EMBL:AIC16547.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_548_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9806..10417
DNA (612bp) protein (204aa)
atpE; archaeal A1A0-type ATP synthase, subunit E (EC:3.6.3.14)
V-type proton ATPase subunit E Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJB0_NITGG
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_548_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10418..12202
DNA (1785bp) protein (595aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
atpA; archaeal A1A0-type ATP synthase, subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFG1_NITGG
PLM3_30_b1_sep16_scaffold_548_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12252..13583
DNA (1332bp) protein (444aa)
atpB; archaeal A1A0-type ATP synthase, subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM91_NITGG
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_548_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13600..14244
DNA (645bp) protein (215aa)
atpD; archaeal A1A0-type ATP synthase, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL19_NITGG
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_548_18
unknown

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14263..14409
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_548_19
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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14649..14981
DNA (333bp) protein (111aa)
ATP synthase subunit C (EC:3.6.3.14)
H+transporting two-sector ATPase C subunit Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLN1_9ARCH
H+transporting two-sector ATPase C subunit {ECO:0000313|EMBL:EGG41615.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
PLM3_30_b1_sep16_scaffold_548_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15234..17327
DNA (2094bp) protein (698aa)
atpI; archaeal A1A0-type ATP synthase, subunit I (EC:3.6.3.14)
Archaeal A1A0-type ATP synthase, subunit I Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJB3_NITGG
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_548_21
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(17440..17697)
DNA (258bp) protein (86aa)
archaeal/vacuolar-type H+-ATPase subunit C (EC:3.6.3.14)
Archaeal/vacuolar-type H+-ATPase subunit C {ECO:0000313|EMBL:AIF85301.1}; EC=3.6.3.14 {ECO:0000313|EMBL:AIF85301.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Archaeal A1A0-type ATP synthase, subunit C Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFG7_NITGG
Displaying 21 items

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