ggKbase home page

PLM3_30_b1_sep16_scaffold_637

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_637_1
unknown

Not on your lists

199..288
DNA (90bp) protein (30aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_637_2
unknown

Not on your lists

260..364
DNA (105bp) protein (35aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_637_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(804..1112)
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INJ8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59499.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_637_4
unknown

Not on your lists

comp(1288..1743)
DNA (456bp) protein (152aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_637_5
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1882..3036)
DNA (1155bp) protein (385aa)
hypothetical protein Tax=euryarchaeote SCGC AAA261-E04 RepID=UPI00037C6640
major facilitator superfamily transporter
Major facilitator superfamily transporter {ECO:0000313|EMBL:AIC16058.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_637_6
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(3109..4155)
DNA (1047bp) protein (349aa)
putative adenylate/guanylate cyclase (EC:4.6.1.1)
Adenylate/guanylate cyclase catalytic domain protein Tax=Leptospira vanthielii serovar Holland str. Waz Holland = ATCC 700522 RepID=N1WB37_9LEPT
Adenylate/guanylate cyclase {ECO:0000313|EMBL:KJU87029.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
PLM3_30_b1_sep16_scaffold_637_7
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(4684..5109)
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHC8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83382.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_637_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

5199..5927
DNA (729bp) protein (243aa)
DedA family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0III1_NITGG
DedA family protein
DedA family protein {ECO:0000313|EMBL:AFU58853.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_637_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

6111..6776
DNA (666bp) protein (222aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82597.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_637_10
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(6888..7589)
DNA (702bp) protein (234aa)
Putative uncharacterized protein Tax=Dehalococcoides mccartyi RepID=D3SKA9_DEHSG
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG07001.1}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi DCMB5.;"
PLM3_30_b1_sep16_scaffold_637_11
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

7733..7954
DNA (222bp) protein (74aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83602.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_637_12
unknown

Not on your lists

8303..8437
DNA (135bp) protein (45aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_637_13
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8621..9709
DNA (1089bp) protein (363aa)
Luciferase-like, subgroup Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1F2_HALTV
Luciferase-like, subgroup
Luciferase-like, subgroup {ECO:0000313|EMBL:ADB63199.1}; species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 /; VKM B-1734) (Halococcus turkmenicus).;"
PLM3_30_b1_sep16_scaffold_637_14
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

9863..10648
DNA (786bp) protein (262aa)
Probable DNA repair protein AF_1726 Tax=Archaeoglobus fulgidus RepID=Y1726_ARCFU
hypothetical protein
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus DSM 8774.;"
PLM3_30_b1_sep16_scaffold_637_15
unknown

Not on your lists

11108..11368
DNA (261bp) protein (87aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_637_16
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(11674..14376)
DNA (2703bp) protein (901aa)
ATP dependent DNA ligase Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FEP5_FLAJ1
DNA ligase D
Tax=RBG_16_Chloroflexi_56_11_curated
PLM3_30_b1_sep16_scaffold_637_17
unknown

Not on your lists

14733..14888
DNA (156bp) protein (52aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_637_18
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(14812..15405)
DNA (594bp) protein (198aa)
hypothetical protein Tax=Nitrosopumilus sp. AR RepID=UPI0003794B41
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16293.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_637_19
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15960..16586
DNA (627bp) protein (209aa)
Uncharacterized protein {ECO:0000313|EMBL:KJH73647.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
Displaying 19 items

View Taxonomy