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PLM3_30_b1_sep16_scaffold_898

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_898_1
unknown

Not on your lists

comp(1..228)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_898_2
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(586..1617)
DNA (1032bp) protein (344aa)
Putative xylanase/chitin deacetylase Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CEV2_DESTA
putative xylanase/chitin deacetylase
Putative xylanase/chitin deacetylase {ECO:0000313|EMBL:AFM28093.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
PLM3_30_b1_sep16_scaffold_898_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1971..3638)
DNA (1668bp) protein (556aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICY4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59226.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_898_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3635..4234)
DNA (600bp) protein (200aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH64_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83427.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_898_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

4518..4973
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59228.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_898_trna_1
unknown

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comp(4986..5060)
DNA (75bp)
transferRNA Gly
PLM3_30_b1_sep16_scaffold_898_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5265..5885)
DNA (621bp) protein (207aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICY7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59231.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_898_7
unknown

Not on your lists

comp(6101..6277)
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_898_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

6511..6996
DNA (486bp) protein (162aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDS2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59536.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_898_9
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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7265..7981
DNA (717bp) protein (239aa)
Hemolysin-type calcium-binding region Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H1M0_METFK
hemolysin-type calcium-binding region
Hemolysin-type calcium-binding region {ECO:0000313|EMBL:ABE49617.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
PLM3_30_b1_sep16_scaffold_898_10
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(8023..8943)
DNA (921bp) protein (307aa)
Serine/threonine protein kinase Tax=Crinalium epipsammum PCC 9333 RepID=K9W4I8_9CYAN
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AFZ14709.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
PLM3_30_b1_sep16_scaffold_898_11
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(9140..9454)
DNA (315bp) protein (105aa)
pterin-4a-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Putative pterin-4-alpha-carbinolamine dehydratase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INL3_NITGG
PLM3_30_b1_sep16_scaffold_898_12
unknown

Not on your lists

9772..10569
DNA (798bp) protein (266aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_898_13
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11120..12877)
DNA (1758bp) protein (586aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IMC5_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB62870.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
phoA; metallophosphoesterase
PLM3_30_b1_sep16_scaffold_898_14
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

13003..13623
DNA (621bp) protein (207aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI00036E7358
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83077.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_898_15
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

13878..14450
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=Microvirga sp. WSM3557 RepID=I4Z1H3_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15887.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_898_16
Ceratitis capitata, Ceratitis, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(14465..14617)
DNA (153bp) protein (51aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037BD39D
RING finger protein nhl-1 {ECO:0000313|EMBL:JAB90715.1}; species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Ceratitis; Ceratitis.;" source="Ceratitis capitata (Mediterranean fruit fly) (Tephritis capitata).;"
NHL repeat-containing protein
Displaying 17 items

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