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PLM3_30_b1_sep16_scaffold_10654

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_10654_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..795)
DNA (795bp) protein (265aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
2-isopropylmalate synthase Tax=Afipia broomeae ATCC 49717 RepID=K8PA89_9BRAD
2-isopropylmalate synthase
PLM3_30_b1_sep16_scaffold_10654_2
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1233..1748)
DNA (516bp) protein (172aa)
Acetyltransferase Tax=Bradyrhizobium sp. WSM1253 RepID=I2QFF7_9BRAD
Acetyltransferase {ECO:0000313|EMBL:EIG58513.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
acetyltransferase
PLM3_30_b1_sep16_scaffold_10654_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1745..2638)
DNA (894bp) protein (298aa)
Uncharacterized protein Tax=Rhodovulum sp. PH10 RepID=J5PPT8_9RHOB
PPK2 family polyphosphate:nucleotide phosphotransferase {ECO:0000313|EMBL:KFC66581.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_10654_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2648..3364)
DNA (717bp) protein (239aa)
Uncharacterized protein Tax=Rhodovulum sp. PH10 RepID=J6UI06_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW13194.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_10654_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3398..3970)
DNA (573bp) protein (191aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI0002E948FD
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:KFC67066.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
PhzF family phenazine biosynthesis protein
PLM3_30_b1_sep16_scaffold_10654_6
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3967..4218)
DNA (252bp) protein (84aa)
phenazine biosynthesis protein PhzF Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003739A7E
PhzF family phenazine biosynthesis protein
PhzF family phenazine biosynthesis protein {ECO:0000313|EMBL:GAN47824.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
PLM3_30_b1_sep16_scaffold_10654_7
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4285..5133)
DNA (849bp) protein (283aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
Pyridoxal kinase Tax=Rhodovulum sp. PH10 RepID=J6LKD8_9RHOB
pyridoxamine kinase
PLM3_30_b1_sep16_scaffold_10654_8
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5230..6249)
DNA (1020bp) protein (340aa)
ABC transporter substrate-binding protein Tax=Bradyrhizobium sp. S23321 RepID=I0G2T0_9BRAD
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAL75067.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
PLM3_30_b1_sep16_scaffold_10654_trna_1
unknown

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6407..6479
DNA (73bp)
transferRNA Lys
PLM3_30_b1_sep16_scaffold_10654_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6496..6672)
DNA (177bp) protein (59aa)
Endoribonuclease L-PSP Tax=Methylobacterium sp. (strain 4-46) RepID=B0U9J5_METS4
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:KFC64160.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
endoribonuclease L-PSP
PLM3_30_b1_sep16_scaffold_10654_10
bacterium YEK0313, Bacteria

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comp(6630..6959)
DNA (330bp) protein (110aa)
Transcription regulator Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FF2_RHILO
Endoribonuclease L-PSP {ECO:0000313|EMBL:CEJ10079.1}; species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulator
PLM3_30_b1_sep16_scaffold_10654_11
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6956..8125)
DNA (1170bp) protein (390aa)
Dihydroorotase {ECO:0000313|EMBL:EJZ35040.1}; EC=3.5.2.3 {ECO:0000313|EMBL:EJZ35040.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
dihydroorotase Tax=Mesorhizobium sp. WSM4349 RepID=UPI000380C828
dihydroorotase
PLM3_30_b1_sep16_scaffold_10654_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8159..9316)
DNA (1158bp) protein (386aa)
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279026};; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00279018};; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI00036988DD
acetylornithine deacetylase
PLM3_30_b1_sep16_scaffold_10654_13
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9514..10920
DNA (1407bp) protein (469aa)
amidase (EC:3.5.1.4)
Amidase {ECO:0000313|EMBL:ACL55262.1}; EC=3.5.1.4 {ECO:0000313|EMBL:ACL55262.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
Amidase Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8I9K9_METNO
PLM3_30_b1_sep16_scaffold_10654_14
bacterium YEK0313, Bacteria

Not on your lists

11071..11562
DNA (492bp) protein (164aa)
(2Fe-2S)-binding domain protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5Z6_LEPCP
Isoquinoline 1-oxidoreductase subunit alpha {ECO:0000313|EMBL:CEJ14988.1}; species="Bacteria.;" source="bacterium YEK0313.;"
2Fe-2S iron-sulfur cluster-binding domain-containing protein
PLM3_30_b1_sep16_scaffold_10654_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11573..13768
DNA (2196bp) protein (732aa)
aldehyde dehydrogenase Tax=Bradyrhizobium japonicum RepID=UPI000364AED3
Isoquinoline 1-oxidoreductase, beta subunit {ECO:0000313|EMBL:KFC63581.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative aldehyde dehydrogenase protein
Displaying 16 items

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