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PLM3_30_b1_sep16_scaffold_1811

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_1811_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1393)
DNA (1392bp) protein (464aa)
Tetratricopeptide TPR_4 protein Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QIB0_RHOPT
hypothetical protein
Tetratricopeptide TPR_4 protein {ECO:0000313|EMBL:ACF02910.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
PLM3_30_b1_sep16_scaffold_1811_2
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1530..2384)
DNA (855bp) protein (285aa)
Uncharacterized protein Tax=Rhodovulum sp. PH10 RepID=J9DX63_9RHOB
Bradyrhizobium elkanii strain UASWS1015 Contig179, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47662.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_1811_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2384..2830)
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Bradyrhizobiaceae RepID=K8P5A7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37732.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_1811_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2827..3915)
DNA (1089bp) protein (363aa)
Flagellar motor switch protein FliM Tax=Rhodovulum sp. PH10 RepID=J9DTD0_9RHOB
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
fliM; flagellar motor switch protein FliM
PLM3_30_b1_sep16_scaffold_1811_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3891..4550)
DNA (660bp) protein (220aa)
flagellar basal body protein FliL Tax=Rhodopseudomonas sp. B29 RepID=UPI0003491BC4
fliL; flagellar basal body-associated protein FliL
Flagellar basal body-associated protein FliL {ECO:0000313|EMBL:ABD08479.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
PLM3_30_b1_sep16_scaffold_1811_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4855..5622
DNA (768bp) protein (256aa)
Flagellar basal body rod protein Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07RE6_RHOP5
flgF; flagellar basal body rod protein FlgF
Flagellar basal body rod protein {ECO:0000313|EMBL:ABJ05488.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
PLM3_30_b1_sep16_scaffold_1811_7
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5646..6434
DNA (789bp) protein (263aa)
Flagellar basal-body rod protein FlgG Tax=Rhodovulum sp. PH10 RepID=J9DX57_9RHOB
Flagellar basal body rod protein FlgG {ECO:0000313|EMBL:ETR75836.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
flgG; flagellar basal body rod protein FlgG
PLM3_30_b1_sep16_scaffold_1811_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6447..7406
DNA (960bp) protein (320aa)
Flagella basal body P-ring formation protein FlgA Tax=Afipia broomeae ATCC 49717 RepID=K8PDB5_9BRAD
Flagellar basal body P-ring biosynthesis protein FlgA {ECO:0000313|EMBL:ETR75837.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
flgA; flagellar basal body P-ring biosynthesis protein FlgA
PLM3_30_b1_sep16_scaffold_1811_9
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7403..8176
DNA (774bp) protein (258aa)
flagellar L-ring protein FlgH Tax=Bradyrhizobium japonicum RepID=UPI000382A204
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
flgH; flagellar basal body L-ring protein
PLM3_30_b1_sep16_scaffold_1811_10
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8399..8878)
DNA (480bp) protein (160aa)
RNA polymerase-binding transcription factor DksA Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I3X5_AZOC5
Zn-finger protein
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
PLM3_30_b1_sep16_scaffold_1811_11
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9022..9453)
DNA (432bp) protein (144aa)
Assembly regulator FliX Tax=Bradyrhizobium sp. S23321 RepID=I0G4D6_9BRAD
fliX; assembly regulator FliX
Flagellar trans-acting factor FliX {ECO:0000313|EMBL:EGP06525.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
PLM3_30_b1_sep16_scaffold_1811_12
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9689..10789
DNA (1101bp) protein (367aa)
Flagellar P-ring protein Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQB2_9BRAD
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
flgI; flagellar basal body P-ring biosynthesis protein FlgA
PLM3_30_b1_sep16_scaffold_1811_13
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10762..10944
DNA (183bp) protein (61aa)
Uncharacterized protein Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z6G6_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM88641.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
PLM3_30_b1_sep16_scaffold_1811_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10941..11417
DNA (477bp) protein (159aa)
Uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07RF5_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ05479.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
PLM3_30_b1_sep16_scaffold_1811_15
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11617..11982
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Rhodovulum sp. PH10 RepID=J6UB68_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW09874.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_1811_16
bacterium YEK0313, Bacteria

Not on your lists

12188..13453
DNA (1266bp) protein (422aa)
Flagellar hook-associated protein FliD Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RER6_PELHB
Flagellin {ECO:0000313|EMBL:CEJ13854.1}; species="Bacteria.;" source="bacterium YEK0313.;"
flagellar hook-associated protein FliD
PLM3_30_b1_sep16_scaffold_1811_17
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13392..13580
DNA (189bp) protein (63aa)
Flagellar hook-associated protein FliD Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RER5_PELHB
flagellar hook-associated protein FliD
Flagellar hook-associated protein FliD {ECO:0000313|EMBL:AEQ51886.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
PLM3_30_b1_sep16_scaffold_1811_18
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13734..15176
DNA (1443bp) protein (481aa)
Flagellar hook-associated protein FliD Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RER6_PELHB
flagellar hook-associated protein FliD
Flagellar hook-associated protein FliD {ECO:0000313|EMBL:AEQ51887.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
PLM3_30_b1_sep16_scaffold_1811_19
bacterium YEK0313, Bacteria

Not on your lists

15257..15691
DNA (435bp) protein (145aa)
Flagellar FlbT family protein Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HW76_PARL1
Flagellum biosynthesis repressor protein FlbT {ECO:0000313|EMBL:CEJ13859.1}; species="Bacteria.;" source="bacterium YEK0313.;"
flagellar FlbT family protein
PLM3_30_b1_sep16_scaffold_1811_20
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15633..15998
DNA (366bp) protein (122aa)
Flagellar FlaF Tax=Rhodovulum sp. PH10 RepID=J9A1M3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:CDP51936.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
flaF; flagellar biosynthesis regulatory protein FlaF
PLM3_30_b1_sep16_scaffold_1811_21
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16049..16366)
DNA (318bp) protein (106aa)
Solute carrier family 10 (Sodium/bile acid cotransporter), member 7 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HN52_9BRAD
Flagellar protein {ECO:0000313|EMBL:KJC42755.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
flagellin and related hook-associated protein
Displaying 21 items

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