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PLM3_30_b1_sep16_scaffold_5048

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_5048_1
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(92..814)
DNA (723bp) protein (241aa)
3-oxoacyl-[acyl-carrier protein] reductase Tax=Cystobacter fuscus DSM 2262 RepID=S9NZG6_9DELT
FabG protein {ECO:0000313|EMBL:BAQ44748.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
short-chain dehydrogenase/reductase SDR
PLM3_30_b1_sep16_scaffold_5048_2
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(845..1648)
DNA (804bp) protein (268aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase Tax=Roseibium sp. TrichSKD4 RepID=E2CPI7_9RHOB
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_30_b1_sep16_scaffold_5048_3
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2132..2791
DNA (660bp) protein (220aa)
hypothetical protein Tax=Afipia birgiae RepID=UPI000380983A
hypothetical protein
Blr6210 protein {ECO:0000313|EMBL:BAC51475.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
PLM3_30_b1_sep16_scaffold_5048_4
bacterium YEK0313, Bacteria

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comp(2812..3258)
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:CEJ13352.1}; species="Bacteria.;" source="bacterium YEK0313.;"
Thioesterase domain-containing protein bin=GWA2_Methylomirabilis_73_35 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thioesterase domain-containing protein
PLM3_30_b1_sep16_scaffold_5048_5
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3262..3786)
DNA (525bp) protein (175aa)
Urease accessory protein UreE Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HFL7_9BRAD
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
ureE; urease accessory protein UreE
PLM3_30_b1_sep16_scaffold_5048_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3786..4664)
DNA (879bp) protein (293aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase Tax=Rhodovulum sp. PH10 RepID=J6UAB8_9RHOB
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:EJW10026.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
CDP-diacylglycerol/serine O-phosphatidyltransferase
PLM3_30_b1_sep16_scaffold_5048_7
unknown

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comp(4717..5118)
DNA (402bp) protein (134aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_5048_8
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5301..5999)
DNA (699bp) protein (233aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
phosphatidylserine decarboxylase (EC:4.1.1.65)
phosphatidylserine decarboxylase Tax=Bradyrhizobium elkanii RepID=UPI00031E4B07
PLM3_30_b1_sep16_scaffold_5048_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6240..8204)
DNA (1965bp) protein (655aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8PRS3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42220.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter
PLM3_30_b1_sep16_scaffold_5048_10
unknown

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comp(8329..9285)
DNA (957bp) protein (319aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_5048_11
unknown

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comp(9267..9362)
DNA (96bp) protein (32aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_5048_12
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9405..10010
DNA (606bp) protein (202aa)
TIGR00730 family protein Tax=Bradyrhizobium sp. YR681 RepID=J2VXQ7_9BRAD
TIGR00730 family protein {ECO:0000313|EMBL:EJN11037.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
lysine decarboxylase
PLM3_30_b1_sep16_scaffold_5048_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

10021..12165
DNA (2145bp) protein (715aa)
hypothetical protein Tax=alpha proteobacterium SCGC AB-629-F11 RepID=UPI00036F0482
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_30_b1_sep16_scaffold_5048_14
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12162..13721
DNA (1560bp) protein (520aa)
Peptidoglycan transpeptidase, ErfK-YbiS-YhnG family Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGK6_NITHX
Uncharacterized protein {ECO:0000313|EMBL:KJC56517.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_5048_15
Hyphomonas chukchiensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13841..14416)
DNA (576bp) protein (192aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI000380F552
Uncharacterized protein {ECO:0000313|EMBL:KCZ58970.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchiensis.;"
metal-dependent protein of the double-stranded beta helix superfamily-like protein
PLM3_30_b1_sep16_scaffold_5048_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14502..15134)
DNA (633bp) protein (211aa)
Uncharacterized protein Tax=Cupriavidus basilensis OR16 RepID=H1S779_9BURK
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
Displaying 16 items

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