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PLM3_30_b1_sep16_scaffold_5721

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_5721_1
unknown

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2..238
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_5721_2
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(190..753)
DNA (564bp) protein (188aa)
Sulfonate transport system substrate-binding protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HGG1_9BRAD
Sulfonate transport system substrate-binding protein {ECO:0000313|EMBL:ERF83903.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_5721_3
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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812..1375
DNA (564bp) protein (188aa)
pdxH; pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
pyridoxamine 5''''-phosphate oxidase Tax=Bradyrhizobium elkanii RepID=UPI00037EE632
PLM3_30_b1_sep16_scaffold_5721_4
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1389..2147
DNA (759bp) protein (253aa)
oxidoreductase Tax=Mesorhizobium sp. WSM4349 RepID=UPI00035E92AA
Oxidoreductase {ECO:0000313|EMBL:KJC46976.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
fixR; short-chain alcohol dehydrogenase
PLM3_30_b1_sep16_scaffold_5721_5
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2184..2993)
DNA (810bp) protein (270aa)
Magnesium and cobalt transporter CorA Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H2B4_9BRAD
Magnesium transporter {ECO:0000313|EMBL:KJC60708.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
corA; magnesium/cobalt transport protein
PLM3_30_b1_sep16_scaffold_5721_6
unknown

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comp(3078..3257)
DNA (180bp) protein (60aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_5721_7
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3640..4308
DNA (669bp) protein (223aa)
Putative uncharacterized protein Tax=Bradyrhizobium sp. WSM471 RepID=H5YIX3_9BRAD
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:KJC50333.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_5721_8
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4419..4724)
DNA (306bp) protein (102aa)
Uncharacterized protein Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GMQ2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ23924.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_5721_9
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4742..6136)
DNA (1395bp) protein (465aa)
Multidrug resistance protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D9U3_BRAJP
Major facilitator transporter {ECO:0000313|EMBL:KGT79854.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
multidrug resistance protein
PLM3_30_b1_sep16_scaffold_5721_10
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6291..7163
DNA (873bp) protein (291aa)
ECF subfamily RNA polymerase sigma-24 subunit Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUY2_9RHIZ
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EHK55461.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
RNA polymerase sigma factor, sigma-70 family
PLM3_30_b1_sep16_scaffold_5721_11
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7160..8548)
DNA (1389bp) protein (463aa)
Aminotransferase class-III Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A1Z2_STAND
class III aminotransferase
Aminotransferase class-III {ECO:0000313|EMBL:ADH87608.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
PLM3_30_b1_sep16_scaffold_5721_12
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8650..9114)
DNA (465bp) protein (155aa)
Putative transcriptional regulatory protein, XRE family Tax=Azospirillum brasilense Sp245 RepID=G8AY87_AZOBR
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:AIB15274.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Displaying 12 items

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